Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAM1L1Q8N609 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAM1L1Q8N609 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRAM1L1Q8N609 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAM1L1Q8N609 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAM1L1Q8N609 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAM1L1Q8N609 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 AL845331.1-201ENST00000424978 1190 ntBASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 VENTXP7-201ENST00000475503 772 ntBASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAM1L1Q8N609 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 AC138932.1-201ENST00000534164 6830 ntBASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 HCG4P8-203ENST00000443049 980 ntBASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 LINC00265-3P-201ENST00000447588 903 ntBASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 TOB2P1-201ENST00000469761 992 ntBASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAM1L1Q8N609 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAM1L1Q8N609 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAM1L1Q8N609 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAM1L1Q8N609 AC233702.3-201ENST00000578656 1387 ntBASIC17.83■□□□□ 0.45
TRAM1L1Q8N609 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAM1L1Q8N609 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAM1L1Q8N609 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms