Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 MIR1224-201ENST00000408193 85 ntBASIC15.08■□□□□ 0
C11orf42Q8N5U0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 HLA-F-220ENST00000434407 884 ntBASIC15.08■□□□□ 0
C11orf42Q8N5U0 AC092647.4-201ENST00000457211 535 ntBASIC15.08■□□□□ 0
C11orf42Q8N5U0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.08■□□□□ 0
C11orf42Q8N5U0 LINC01238-205ENST00000567549 1107 ntBASIC15.08■□□□□ 0
C11orf42Q8N5U0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.08■□□□□ 0
C11orf42Q8N5U0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.08■□□□□ 0
C11orf42Q8N5U0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.08■□□□□ 0
C11orf42Q8N5U0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
C11orf42Q8N5U0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
C11orf42Q8N5U0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 AC012313.1-201ENST00000593393 3059 ntBASIC15.08■□□□□ 0
C11orf42Q8N5U0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 AL391807.1-203ENST00000604392 2365 ntBASIC15.07■□□□□ 0
C11orf42Q8N5U0 AC009113.1-201ENST00000570267 2443 ntBASIC15.07■□□□□ 0
C11orf42Q8N5U0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 AC104581.1-202ENST00000635932 2618 ntBASIC15.07■□□□□ 0
C11orf42Q8N5U0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 AP000997.3-201ENST00000623333 2250 ntBASIC15.07■□□□□ 0
C11orf42Q8N5U0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 AL031133.1-201ENST00000406807 723 ntBASIC15.07■□□□□ 0
C11orf42Q8N5U0 SPDYE13P-201ENST00000445314 798 ntBASIC15.07■□□□□ 0
C11orf42Q8N5U0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 AC009065.1-201ENST00000564055 1225 ntBASIC15.07■□□□□ 0
C11orf42Q8N5U0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf42Q8N5U0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.07■□□□□ 0
C11orf42Q8N5U0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.06■□□□□ 0
C11orf42Q8N5U0 AC083849.1-201ENST00000615227 514 ntBASIC15.06■□□□□ 0
C11orf42Q8N5U0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.06■□□□□ 0
C11orf42Q8N5U0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf42Q8N5U0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms