Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATPAF2Q8N5M1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 LINC00602-201ENST00000629776 2065 ntBASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 MIR662-201ENST00000384847 95 ntBASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATPAF2Q8N5M1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 AC132938.6-201ENST00000623828 1655 ntBASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 AP003733.1-201ENST00000491725 852 ntBASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 LINC00167-201ENST00000530583 1419 ntBASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 AC018470.1-201ENST00000624790 3129 ntBASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF2Q8N5M1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATPAF2Q8N5M1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ATPAF2Q8N5M1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF2Q8N5M1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF2Q8N5M1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF2Q8N5M1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.53■□□□□ 0.56
ATPAF2Q8N5M1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
ATPAF2Q8N5M1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF2Q8N5M1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms