Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNPOQ8N3V7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 HLA-J-201ENST00000462773 1622 ntBASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 AC021087.4-201ENST00000563761 564 ntBASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.35■□□□□ 0.53
SYNPOQ8N3V7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 AC005104.2-201ENST00000427818 678 ntBASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNPOQ8N3V7 AL356309.3-201ENST00000624132 1934 ntBASIC18.33■□□□□ 0.53
SYNPOQ8N3V7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SYNPOQ8N3V7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNPOQ8N3V7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 PGAM5P1-201ENST00000518923 814 ntBASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 SDHAP2-201ENST00000455183 2001 ntBASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 AL024508.2-201ENST00000607749 1894 ntBASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNPOQ8N3V7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms