Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 AC099336.1-202ENST00000602961 463 ntBASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 AC138894.3-201ENST00000603787 634 ntBASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 LTB4R2-202ENST00000528054 3092 ntBASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHTF2Q8N3S3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 MIR149-201ENST00000384879 89 ntBASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 NSUN5P1-202ENST00000421140 1535 ntBASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 NSUN5P2-203ENST00000457352 1529 ntBASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHTF2Q8N3S3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms