Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC83Q8IWF9 HMGA1P5-201ENST00000412453 271 ntBASIC21.28■■□□□ 1
CCDC83Q8IWF9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.28■■□□□ 1
CCDC83Q8IWF9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.28■■□□□ 1
CCDC83Q8IWF9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.28■■□□□ 1
CCDC83Q8IWF9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC83Q8IWF9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC83Q8IWF9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC83Q8IWF9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.28■■□□□ 1
CCDC83Q8IWF9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
CCDC83Q8IWF9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC83Q8IWF9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CCDC83Q8IWF9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.28■■□□□ 1
CCDC83Q8IWF9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC83Q8IWF9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCDC83Q8IWF9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC83Q8IWF9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.27■■□□□ 1
CCDC83Q8IWF9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.27■■□□□ 1
CCDC83Q8IWF9 AC093827.2-201ENST00000512654 315 ntBASIC21.27■■□□□ 1
CCDC83Q8IWF9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.27■■□□□ 1
CCDC83Q8IWF9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.27■■□□□ 1
CCDC83Q8IWF9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.27■■□□□ 1
CCDC83Q8IWF9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC83Q8IWF9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.27■■□□□ 1
CCDC83Q8IWF9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CCDC83Q8IWF9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.27■□□□□ 0.99
CCDC83Q8IWF9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC83Q8IWF9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC83Q8IWF9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC83Q8IWF9 AC100803.2-201ENST00000562459 1963 ntBASIC21.27■□□□□ 0.99
CCDC83Q8IWF9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 BCL2-203ENST00000589955 5011 ntBASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 LINC01568-207ENST00000641790 1380 ntBASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 MIR3917-201ENST00000580971 93 ntBASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC83Q8IWF9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 AL157888.1-201ENST00000631930 593 ntBASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC83Q8IWF9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC83Q8IWF9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms