Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 MIR6786-201ENST00000616843 113 ntBASIC18.71■□□□□ 0.59
CCDC25Q86WR0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.58
CCDC25Q86WR0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
CCDC25Q86WR0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC25Q86WR0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.71■□□□□ 0.58
CCDC25Q86WR0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 AL353807.1-201ENST00000427475 662 ntBASIC18.7■□□□□ 0.58
CCDC25Q86WR0 B3GAT3P1-201ENST00000471720 806 ntBASIC18.7■□□□□ 0.58
CCDC25Q86WR0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC25Q86WR0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 AC073648.6-201ENST00000641589 218 ntBASIC18.69■□□□□ 0.58
CCDC25Q86WR0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC25Q86WR0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC25Q86WR0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms