Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16■□□□□ 0.15
RTTNQ86VV8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RTTNQ86VV8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16■□□□□ 0.15
RTTNQ86VV8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RTTNQ86VV8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RTTNQ86VV8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
RTTNQ86VV8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 AC111152.3-201ENST00000569699 673 ntBASIC15.99■□□□□ 0.15
RTTNQ86VV8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 AC112497.1-201ENST00000624824 639 ntBASIC15.99■□□□□ 0.15
RTTNQ86VV8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
RTTNQ86VV8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTTNQ86VV8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 AC092597.1-201ENST00000487352 616 ntBASIC15.98■□□□□ 0.15
RTTNQ86VV8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.98■□□□□ 0.15
RTTNQ86VV8 AL024508.2-201ENST00000607749 1894 ntBASIC15.98■□□□□ 0.15
RTTNQ86VV8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTTNQ86VV8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms