Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 SLC25A1P2-201ENST00000430693 912 ntBASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 CCR12P-201ENST00000446203 998 ntBASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 AP003071.4-201ENST00000562276 1284 ntBASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 AC009065.1-201ENST00000564055 1225 ntBASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 MIR4785-201ENST00000585005 73 ntBASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 KRT8P50-201ENST00000562022 1438 ntBASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 ESPNP-201ENST00000270691 2015 ntBASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 AC036111.1-201ENST00000533973 1582 ntBASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 REXO1L9P-201ENST00000604264 2108 ntBASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 AC138028.4-201ENST00000564984 1845 ntBASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 TSPY17P-201ENST00000450329 467 ntBASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 KRT8P7-201ENST00000533003 1432 ntBASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 AC068880.1-201ENST00000507289 2297 ntBASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 POR-209ENST00000439269 1858 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 AC005332.8-201ENST00000622750 2735 ntBASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL55Q7Z7F7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 AC009102.3-201ENST00000623118 1491 ntBASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms