Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf88Q6PI97 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 KRT8P8-201ENST00000434750 1448 ntBASIC15.78■□□□□ 0.12
C11orf88Q6PI97 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.78■□□□□ 0.12
C11orf88Q6PI97 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 AC004264.1-201ENST00000608354 794 ntBASIC15.78■□□□□ 0.12
C11orf88Q6PI97 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.78■□□□□ 0.12
C11orf88Q6PI97 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms