Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 NFIC-211ENST00000641145 8399 ntBASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 KRT16P6-202ENST00000425692 1426 ntBASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 RBM17P2-201ENST00000616397 1405 ntBASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 REXO1L9P-201ENST00000604264 2108 ntBASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 DBET-201ENST00000630918 3363 ntBASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 AL355802.2-201ENST00000402069 882 ntBASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 CYP2T1P-201ENST00000432607 1285 ntBASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 AC245052.3-201ENST00000450182 901 ntBASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 AC007322.4-201ENST00000509611 723 ntBASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 AC083906.2-201ENST00000511578 360 ntBASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM88Q6PEY1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 AC105036.2-201ENST00000569468 176 ntBASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 AC008694.1-202ENST00000636953 945 ntBASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 AC068338.2-201ENST00000563278 1430 ntBASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms