Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 AC007663.1-201ENST00000438948 1240 ntBASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 AC008622.2-201ENST00000617006 1229 ntBASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 AC080080.1-201ENST00000625121 2420 ntBASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 KRT18P22-201ENST00000402024 1347 ntBASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 AC093677.2-201ENST00000600169 1863 ntBASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 AC145285.6-201ENST00000604632 637 ntBASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 HEIH-201ENST00000623091 1652 ntBASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATPAF1Q5TC12 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 AC124067.4-201ENST00000519691 2379 ntBASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 AC012306.2-201ENST00000609350 630 ntBASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 AC097493.4-201ENST00000641197 219 ntBASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 AC068587.9-201ENST00000641814 219 ntBASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 LINC01568-207ENST00000641790 1380 ntBASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.71■□□□□ 0.11
ATPAF1Q5TC12 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
ATPAF1Q5TC12 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms