Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.46■□□□□ 0.39
HMGCS1Q01581 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGCS1Q01581 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HMGCS1Q01581 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGCS1Q01581 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGCS1Q01581 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HMGCS1Q01581 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGCS1Q01581 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGCS1Q01581 HMGA1P5-201ENST00000412453 271 ntBASIC17.44■□□□□ 0.38
HMGCS1Q01581 AC087499.1-201ENST00000418141 1075 ntBASIC17.44■□□□□ 0.38
HMGCS1Q01581 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HMGCS1Q01581 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGCS1Q01581 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGCS1Q01581 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGCS1Q01581 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGCS1Q01581 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.43■□□□□ 0.38
HMGCS1Q01581 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms