Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.26■□□□□ 0.35
PHC1P78364 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.26■□□□□ 0.35
PHC1P78364 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.26■□□□□ 0.35
PHC1P78364 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHC1P78364 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 AC009053.2-201ENST00000563701 2365 ntBASIC17.25■□□□□ 0.35
PHC1P78364 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.25■□□□□ 0.35
PHC1P78364 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.25■□□□□ 0.35
PHC1P78364 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.25■□□□□ 0.35
PHC1P78364 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.25■□□□□ 0.35
PHC1P78364 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PHC1P78364 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.25■□□□□ 0.35
PHC1P78364 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.25■□□□□ 0.35
PHC1P78364 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.25■□□□□ 0.35
PHC1P78364 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.25■□□□□ 0.35
PHC1P78364 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PHC1P78364 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PHC1P78364 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.25■□□□□ 0.35
PHC1P78364 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHC1P78364 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PHC1P78364 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PHC1P78364 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.24■□□□□ 0.35
PHC1P78364 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PHC1P78364 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.24■□□□□ 0.35
PHC1P78364 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PHC1P78364 BX088651.1-201ENST00000540551 451 ntBASIC17.24■□□□□ 0.35
PHC1P78364 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.24■□□□□ 0.35
PHC1P78364 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PHC1P78364 AC112497.1-201ENST00000624824 639 ntBASIC17.24■□□□□ 0.35
PHC1P78364 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PHC1P78364 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PHC1P78364 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.24■□□□□ 0.35
PHC1P78364 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHC1P78364 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.24■□□□□ 0.35
PHC1P78364 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.24■□□□□ 0.35
PHC1P78364 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
PHC1P78364 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 MIR1238-201ENST00000408483 83 ntBASIC17.23■□□□□ 0.35
PHC1P78364 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.23■□□□□ 0.35
PHC1P78364 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.23■□□□□ 0.35
PHC1P78364 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.23■□□□□ 0.35
PHC1P78364 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.23■□□□□ 0.35
PHC1P78364 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.23■□□□□ 0.35
PHC1P78364 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.23■□□□□ 0.35
PHC1P78364 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.23■□□□□ 0.35
PHC1P78364 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PHC1P78364 AC141586.5-201ENST00000624546 2050 ntBASIC17.23■□□□□ 0.35
PHC1P78364 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PHC1P78364 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.23■□□□□ 0.35
PHC1P78364 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.23■□□□□ 0.35
PHC1P78364 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms