Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
MCCD1P59942 AC246785.2-201ENST00000432512 513 ntBASIC19.35■□□□□ 0.69
MCCD1P59942 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.35■□□□□ 0.69
MCCD1P59942 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.35■□□□□ 0.69
MCCD1P59942 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MCCD1P59942 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.35■□□□□ 0.69
MCCD1P59942 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 REXO1L11P-201ENST00000620964 1927 ntBASIC19.35■□□□□ 0.69
MCCD1P59942 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.34■□□□□ 0.69
MCCD1P59942 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.34■□□□□ 0.69
MCCD1P59942 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.34■□□□□ 0.69
MCCD1P59942 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.34■□□□□ 0.69
MCCD1P59942 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.34■□□□□ 0.69
MCCD1P59942 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.34■□□□□ 0.69
MCCD1P59942 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
MCCD1P59942 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MCCD1P59942 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.34■□□□□ 0.69
MCCD1P59942 GUSBP12-201ENST00000513727 720 ntBASIC19.34■□□□□ 0.69
MCCD1P59942 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.34■□□□□ 0.69
MCCD1P59942 LINC00304-203ENST00000565008 1864 ntBASIC19.34■□□□□ 0.69
MCCD1P59942 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 AC009949.1-201ENST00000623048 1830 ntBASIC19.34■□□□□ 0.69
MCCD1P59942 LINC00896-202ENST00000609602 2128 ntBASIC19.34■□□□□ 0.69
MCCD1P59942 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.34■□□□□ 0.69
MCCD1P59942 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
MCCD1P59942 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.34■□□□□ 0.69
MCCD1P59942 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MCCD1P59942 AC125634.1-201ENST00000438758 1403 ntBASIC19.34■□□□□ 0.69
MCCD1P59942 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.34■□□□□ 0.69
MCCD1P59942 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MCCD1P59942 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MCCD1P59942 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
MCCD1P59942 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.33■□□□□ 0.69
MCCD1P59942 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
MCCD1P59942 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MCCD1P59942 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.33■□□□□ 0.69
MCCD1P59942 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
MCCD1P59942 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
MCCD1P59942 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.33■□□□□ 0.69
MCCD1P59942 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MCCD1P59942 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.33■□□□□ 0.68
MCCD1P59942 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
MCCD1P59942 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.33■□□□□ 0.68
MCCD1P59942 PCED1CP-201ENST00000419887 785 ntBASIC19.33■□□□□ 0.68
MCCD1P59942 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.33■□□□□ 0.68
MCCD1P59942 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.33■□□□□ 0.68
MCCD1P59942 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.33■□□□□ 0.68
MCCD1P59942 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MCCD1P59942 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.33■□□□□ 0.68
MCCD1P59942 AL138831.2-201ENST00000606564 490 ntBASIC19.33■□□□□ 0.68
MCCD1P59942 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MCCD1P59942 LINC01451-201ENST00000623792 534 ntBASIC19.33■□□□□ 0.68
MCCD1P59942 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.33■□□□□ 0.68
MCCD1P59942 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MCCD1P59942 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
MCCD1P59942 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MCCD1P59942 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MCCD1P59942 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.33■□□□□ 0.68
MCCD1P59942 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MCCD1P59942 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MCCD1P59942 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MCCD1P59942 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.33■□□□□ 0.68
MCCD1P59942 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
MCCD1P59942 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.32■□□□□ 0.68
MCCD1P59942 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.32■□□□□ 0.68
MCCD1P59942 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MCCD1P59942 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.32■□□□□ 0.68
MCCD1P59942 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 AC012317.2-201ENST00000623305 2251 ntBASIC19.32■□□□□ 0.68
MCCD1P59942 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MCCD1P59942 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms