Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN20P56880 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN20P56880 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN20P56880 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN20P56880 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN20P56880 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLDN20P56880 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN20P56880 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN20P56880 AC112777.1-201ENST00000540175 1423 ntBASIC16.6■□□□□ 0.25
CLDN20P56880 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN20P56880 ESPNP-201ENST00000270691 2015 ntBASIC16.6■□□□□ 0.25
CLDN20P56880 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN20P56880 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN20P56880 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN20P56880 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN20P56880 TNRC18P3-201ENST00000441896 2691 ntBASIC16.6■□□□□ 0.25
CLDN20P56880 AL163051.1-201ENST00000569214 1512 ntBASIC16.6■□□□□ 0.25
CLDN20P56880 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN20P56880 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN20P56880 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN20P56880 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 AC141586.5-201ENST00000624546 2050 ntBASIC16.59■□□□□ 0.25
CLDN20P56880 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN20P56880 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN20P56880 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CLDN20P56880 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN20P56880 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN20P56880 ZNF444P1-201ENST00000559497 298 ntBASIC16.59■□□□□ 0.25
CLDN20P56880 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 MIR3180-4-201ENST00000582223 153 ntBASIC16.59■□□□□ 0.25
CLDN20P56880 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 AL121956.5-201ENST00000625261 221 ntBASIC16.59■□□□□ 0.25
CLDN20P56880 AL358472.4-201ENST00000633140 710 ntBASIC16.59■□□□□ 0.25
CLDN20P56880 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLDN20P56880 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 AC124067.4-201ENST00000519691 2379 ntBASIC16.59■□□□□ 0.25
CLDN20P56880 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 MYLKP1-201ENST00000509077 1580 ntBASIC16.59■□□□□ 0.25
CLDN20P56880 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN20P56880 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN20P56880 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.58■□□□□ 0.25
CLDN20P56880 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.58■□□□□ 0.25
CLDN20P56880 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CLDN20P56880 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.58■□□□□ 0.25
CLDN20P56880 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
CLDN20P56880 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN20P56880 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN20P56880 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
CLDN20P56880 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN20P56880 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
CLDN20P56880 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 SPDYE13P-201ENST00000445314 798 ntBASIC16.58■□□□□ 0.24
CLDN20P56880 FAM86EP-206ENST00000510506 987 ntBASIC16.58■□□□□ 0.24
CLDN20P56880 VENTXP5-201ENST00000523979 775 ntBASIC16.58■□□□□ 0.24
CLDN20P56880 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN20P56880 AL136038.4-201ENST00000603606 1261 ntBASIC16.58■□□□□ 0.24
CLDN20P56880 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN20P56880 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN20P56880 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN20P56880 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLDN20P56880 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN20P56880 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN20P56880 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN20P56880 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms