Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN17P56750 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 HBZP1-201ENST00000354915 429 ntBASIC16.17■□□□□ 0.18
CLDN17P56750 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN17P56750 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN17P56750 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
CLDN17P56750 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN17P56750 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLDN17P56750 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN17P56750 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLDN17P56750 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN17P56750 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN17P56750 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN17P56750 AC018470.1-201ENST00000624790 3129 ntBASIC16.17■□□□□ 0.18
CLDN17P56750 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN17P56750 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CLDN17P56750 AC093010.1-201ENST00000473625 1624 ntBASIC16.16■□□□□ 0.18
CLDN17P56750 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN17P56750 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN17P56750 KRT18P48-201ENST00000434763 852 ntBASIC16.16■□□□□ 0.18
CLDN17P56750 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 AL671277.2-201ENST00000458060 996 ntBASIC16.16■□□□□ 0.18
CLDN17P56750 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN17P56750 ZNF444P1-201ENST00000559497 298 ntBASIC16.16■□□□□ 0.18
CLDN17P56750 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.16■□□□□ 0.18
CLDN17P56750 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 HYMAI.1-201ENST00000620949 238 ntBASIC16.16■□□□□ 0.18
CLDN17P56750 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN17P56750 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN17P56750 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN17P56750 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN17P56750 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLDN17P56750 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN17P56750 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN17P56750 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN17P56750 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLDN17P56750 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN17P56750 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN17P56750 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CLDN17P56750 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.15■□□□□ 0.18
CLDN17P56750 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 VENTXP5-201ENST00000523979 775 ntBASIC16.15■□□□□ 0.18
CLDN17P56750 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.15■□□□□ 0.18
CLDN17P56750 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN17P56750 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN17P56750 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLDN17P56750 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN17P56750 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN17P56750 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN17P56750 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN17P56750 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN17P56750 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms