Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.75■□□□□ 0.27
PER3P56645 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.75■□□□□ 0.27
PER3P56645 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.75■□□□□ 0.27
PER3P56645 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PER3P56645 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 AC036111.1-201ENST00000533973 1582 ntBASIC16.75■□□□□ 0.27
PER3P56645 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PER3P56645 PKD1P1-201ENST00000458669 6805 ntBASIC16.75■□□□□ 0.27
PER3P56645 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.75■□□□□ 0.27
PER3P56645 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.75■□□□□ 0.27
PER3P56645 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.75■□□□□ 0.27
PER3P56645 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.75■□□□□ 0.27
PER3P56645 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.75■□□□□ 0.27
PER3P56645 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PER3P56645 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.74■□□□□ 0.27
PER3P56645 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.74■□□□□ 0.27
PER3P56645 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.74■□□□□ 0.27
PER3P56645 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 KRT8P3-201ENST00000519669 1449 ntBASIC16.74■□□□□ 0.27
PER3P56645 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.74■□□□□ 0.27
PER3P56645 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.74■□□□□ 0.27
PER3P56645 AL023284.2-201ENST00000405850 579 ntBASIC16.74■□□□□ 0.27
PER3P56645 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 DRAXINP1-201ENST00000437611 948 ntBASIC16.74■□□□□ 0.27
PER3P56645 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.74■□□□□ 0.27
PER3P56645 AC104819.1-201ENST00000504587 486 ntBASIC16.74■□□□□ 0.27
PER3P56645 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PER3P56645 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.74■□□□□ 0.27
PER3P56645 AC117500.6-201ENST00000624871 588 ntBASIC16.74■□□□□ 0.27
PER3P56645 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.74■□□□□ 0.27
PER3P56645 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PER3P56645 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PER3P56645 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.74■□□□□ 0.27
PER3P56645 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PER3P56645 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.74■□□□□ 0.27
PER3P56645 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.73■□□□□ 0.27
PER3P56645 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PER3P56645 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.73■□□□□ 0.27
PER3P56645 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PER3P56645 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.73■□□□□ 0.27
PER3P56645 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.73■□□□□ 0.27
PER3P56645 AC079776.4-201ENST00000511039 504 ntBASIC16.73■□□□□ 0.27
PER3P56645 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.73■□□□□ 0.27
PER3P56645 MIR3180-5-201ENST00000583743 153 ntBASIC16.73■□□□□ 0.27
PER3P56645 AL136038.4-201ENST00000603606 1261 ntBASIC16.73■□□□□ 0.27
PER3P56645 AL732292.2-201ENST00000609649 430 ntBASIC16.73■□□□□ 0.27
PER3P56645 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.73■□□□□ 0.27
PER3P56645 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PER3P56645 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.73■□□□□ 0.27
PER3P56645 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PER3P56645 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.73■□□□□ 0.27
PER3P56645 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PER3P56645 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms