Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PEX3P56589 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 KRT18P65-201ENST00000439811 1286 ntBASIC19.91■□□□□ 0.78
PEX3P56589 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.91■□□□□ 0.78
PEX3P56589 MIR3180-1-201ENST00000580374 94 ntBASIC19.91■□□□□ 0.78
PEX3P56589 MIR3180-3-201ENST00000584616 94 ntBASIC19.91■□□□□ 0.78
PEX3P56589 AC009154.2-201ENST00000621177 724 ntBASIC19.91■□□□□ 0.78
PEX3P56589 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 ABALON-201ENST00000629058 1903 ntBASIC19.91■□□□□ 0.78
PEX3P56589 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.91■□□□□ 0.78
PEX3P56589 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.91■□□□□ 0.78
PEX3P56589 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.91■□□□□ 0.78
PEX3P56589 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PEX3P56589 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PEX3P56589 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.91■□□□□ 0.78
PEX3P56589 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PEX3P56589 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 AC068472.1-201ENST00000474589 881 ntBASIC19.9■□□□□ 0.78
PEX3P56589 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.9■□□□□ 0.78
PEX3P56589 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.9■□□□□ 0.78
PEX3P56589 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PEX3P56589 AL354751.1-201ENST00000412768 1863 ntBASIC19.9■□□□□ 0.78
PEX3P56589 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PEX3P56589 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.9■□□□□ 0.78
PEX3P56589 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.9■□□□□ 0.78
PEX3P56589 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PEX3P56589 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PEX3P56589 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PEX3P56589 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.89■□□□□ 0.77
PEX3P56589 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PEX3P56589 TPSP2-201ENST00000561760 610 ntBASIC19.89■□□□□ 0.77
PEX3P56589 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.89■□□□□ 0.77
PEX3P56589 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PEX3P56589 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
PEX3P56589 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.89■□□□□ 0.77
PEX3P56589 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.89■□□□□ 0.77
PEX3P56589 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PEX3P56589 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PEX3P56589 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PEX3P56589 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
PEX3P56589 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PEX3P56589 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PEX3P56589 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.88■□□□□ 0.77
PEX3P56589 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.88■□□□□ 0.77
PEX3P56589 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 DRAXINP1-201ENST00000437611 948 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms