Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXG1P55316 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
FOXG1P55316 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXG1P55316 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
FOXG1P55316 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXG1P55316 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.84■□□□□ 0.13
FOXG1P55316 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.84■□□□□ 0.13
FOXG1P55316 AC009154.2-201ENST00000621177 724 ntBASIC15.84■□□□□ 0.13
FOXG1P55316 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
FOXG1P55316 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXG1P55316 AP000997.3-201ENST00000623333 2250 ntBASIC15.84■□□□□ 0.13
FOXG1P55316 AC233702.3-201ENST00000578656 1387 ntBASIC15.84■□□□□ 0.13
FOXG1P55316 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXG1P55316 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
FOXG1P55316 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
FOXG1P55316 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.83■□□□□ 0.13
FOXG1P55316 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FOXG1P55316 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
FOXG1P55316 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
FOXG1P55316 AC135050.7-201ENST00000624508 2218 ntBASIC15.83■□□□□ 0.13
FOXG1P55316 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
FOXG1P55316 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
FOXG1P55316 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
FOXG1P55316 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.83■□□□□ 0.13
FOXG1P55316 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXG1P55316 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXG1P55316 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.83■□□□□ 0.12
FOXG1P55316 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXG1P55316 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 KRT18P65-201ENST00000439811 1286 ntBASIC15.83■□□□□ 0.12
FOXG1P55316 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXG1P55316 MTCL1P1-201ENST00000446207 792 ntBASIC15.83■□□□□ 0.12
FOXG1P55316 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.83■□□□□ 0.12
FOXG1P55316 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.83■□□□□ 0.12
FOXG1P55316 CLEC4GP1-201ENST00000596555 870 ntBASIC15.83■□□□□ 0.12
FOXG1P55316 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 AC007613.1-201ENST00000572811 2597 ntBASIC15.83■□□□□ 0.12
FOXG1P55316 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
FOXG1P55316 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
FOXG1P55316 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
FOXG1P55316 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 RNF165-205ENST00000588679 2904 ntBASIC15.83■□□□□ 0.12
FOXG1P55316 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
FOXG1P55316 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXG1P55316 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 AL354751.1-201ENST00000412768 1863 ntBASIC15.82■□□□□ 0.12
FOXG1P55316 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
FOXG1P55316 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
FOXG1P55316 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.82■□□□□ 0.12
FOXG1P55316 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms