Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH13P55290 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH13P55290 AC006116.8-202ENST00000587620 1550 ntBASIC17.72■□□□□ 0.43
CDH13P55290 CYP2D8P-201ENST00000433633 1490 ntBASIC17.72■□□□□ 0.43
CDH13P55290 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH13P55290 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDH13P55290 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH13P55290 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.72■□□□□ 0.43
CDH13P55290 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH13P55290 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH13P55290 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH13P55290 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH13P55290 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH13P55290 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CDH13P55290 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 KRT17P2-201ENST00000300992 1314 ntBASIC17.72■□□□□ 0.43
CDH13P55290 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH13P55290 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH13P55290 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH13P55290 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDH13P55290 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 TSPY14P-201ENST00000303979 915 ntBASIC17.71■□□□□ 0.43
CDH13P55290 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CDH13P55290 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH13P55290 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH13P55290 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.71■□□□□ 0.43
CDH13P55290 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.71■□□□□ 0.43
CDH13P55290 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH13P55290 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH13P55290 AC010240.3-201ENST00000607688 395 ntBASIC17.71■□□□□ 0.43
CDH13P55290 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH13P55290 AC010653.2-201ENST00000623505 997 ntBASIC17.71■□□□□ 0.43
CDH13P55290 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH13P55290 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH13P55290 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CDH13P55290 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH13P55290 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDH13P55290 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH13P55290 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH13P55290 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.71■□□□□ 0.42
CDH13P55290 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.71■□□□□ 0.42
CDH13P55290 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.71■□□□□ 0.42
CDH13P55290 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDH13P55290 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDH13P55290 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH13P55290 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH13P55290 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDH13P55290 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH13P55290 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH13P55290 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH13P55290 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH13P55290 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH13P55290 AC009065.1-201ENST00000564055 1225 ntBASIC17.7■□□□□ 0.42
CDH13P55290 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH13P55290 AP006294.2-201ENST00000641667 209 ntBASIC17.7■□□□□ 0.42
CDH13P55290 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH13P55290 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH13P55290 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH13P55290 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH13P55290 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH13P55290 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH13P55290 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms