Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 MIR940-201ENST00000401276 94 ntBASIC15.73■□□□□ 0.11
HCFC1P51610 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.73■□□□□ 0.11
HCFC1P51610 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.73■□□□□ 0.11
HCFC1P51610 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HCFC1P51610 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HCFC1P51610 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
HCFC1P51610 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 AC125634.1-201ENST00000438758 1403 ntBASIC15.72■□□□□ 0.11
HCFC1P51610 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HCFC1P51610 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 RPS8P6-201ENST00000426177 609 ntBASIC15.72■□□□□ 0.11
HCFC1P51610 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.72■□□□□ 0.11
HCFC1P51610 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HCFC1P51610 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.72■□□□□ 0.11
HCFC1P51610 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.72■□□□□ 0.11
HCFC1P51610 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HCFC1P51610 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.72■□□□□ 0.11
HCFC1P51610 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC15.72■□□□□ 0.11
HCFC1P51610 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
HCFC1P51610 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.72■□□□□ 0.11
HCFC1P51610 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HCFC1P51610 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HCFC1P51610 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.72■□□□□ 0.11
HCFC1P51610 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.72■□□□□ 0.11
HCFC1P51610 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC1P51610 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.72■□□□□ 0.11
HCFC1P51610 FAM215A-202ENST00000632077 792 ntBASIC15.72■□□□□ 0.11
HCFC1P51610 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.71■□□□□ 0.11
HCFC1P51610 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HCFC1P51610 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.71■□□□□ 0.11
HCFC1P51610 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.71■□□□□ 0.11
HCFC1P51610 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 AC104109.2-201ENST00000602919 1418 ntBASIC15.71■□□□□ 0.11
HCFC1P51610 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HCFC1P51610 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HCFC1P51610 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 AC112698.1-201ENST00000510299 916 ntBASIC15.71■□□□□ 0.11
HCFC1P51610 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.71■□□□□ 0.11
HCFC1P51610 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HCFC1P51610 AC008687.5-201ENST00000593746 558 ntBASIC15.71■□□□□ 0.11
HCFC1P51610 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.71■□□□□ 0.11
HCFC1P51610 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.71■□□□□ 0.11
HCFC1P51610 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC1P51610 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.71■□□□□ 0.1
HCFC1P51610 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
HCFC1P51610 HLA-J-201ENST00000462773 1622 ntBASIC15.7■□□□□ 0.1
HCFC1P51610 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC1P51610 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC1P51610 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.7■□□□□ 0.1
HCFC1P51610 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.7■□□□□ 0.1
HCFC1P51610 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.7■□□□□ 0.1
HCFC1P51610 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC1P51610 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC1P51610 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC1P51610 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
HCFC1P51610 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC1P51610 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC1P51610 MYLKP1-201ENST00000509077 1580 ntBASIC15.7■□□□□ 0.1
HCFC1P51610 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HCFC1P51610 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
HCFC1P51610 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HCFC1P51610 RPS2P28-201ENST00000314255 741 ntBASIC15.7■□□□□ 0.1
HCFC1P51610 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.7■□□□□ 0.1
HCFC1P51610 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms