Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 AC012317.2-201ENST00000623305 2251 ntBASIC16.62■□□□□ 0.25
SLC9A3P48764 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC9A3P48764 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 AC141586.5-201ENST00000624546 2050 ntBASIC16.61■□□□□ 0.25
SLC9A3P48764 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC9A3P48764 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
SLC9A3P48764 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC9A3P48764 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC9A3P48764 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC9A3P48764 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC9A3P48764 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SLC9A3P48764 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC9A3P48764 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC9A3P48764 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC9A3P48764 AP003071.4-201ENST00000562276 1284 ntBASIC16.61■□□□□ 0.25
SLC9A3P48764 AL353719.1-201ENST00000566847 864 ntBASIC16.61■□□□□ 0.25
SLC9A3P48764 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC9A3P48764 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC9A3P48764 AL023803.3-201ENST00000615559 522 ntBASIC16.61■□□□□ 0.25
SLC9A3P48764 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC9A3P48764 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC9A3P48764 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC9A3P48764 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC9A3P48764 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC9A3P48764 AL391005.1-201ENST00000623953 2435 ntBASIC16.6■□□□□ 0.25
SLC9A3P48764 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC9A3P48764 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
SLC9A3P48764 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC9A3P48764 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC9A3P48764 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC9A3P48764 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC9A3P48764 MIR718-201ENST00000390190 70 ntBASIC16.6■□□□□ 0.25
SLC9A3P48764 CCR12P-201ENST00000446203 998 ntBASIC16.6■□□□□ 0.25
SLC9A3P48764 WWOX-216ENST00000569818 525 ntBASIC16.6■□□□□ 0.25
SLC9A3P48764 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC9A3P48764 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC9A3P48764 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC9A3P48764 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC9A3P48764 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC9A3P48764 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC9A3P48764 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SLC9A3P48764 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SLC9A3P48764 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC9A3P48764 KRT18P23-201ENST00000435622 1283 ntBASIC16.59■□□□□ 0.25
SLC9A3P48764 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC9A3P48764 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC9A3P48764 AP003041.3-201ENST00000527151 707 ntBASIC16.59■□□□□ 0.25
SLC9A3P48764 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.59■□□□□ 0.25
SLC9A3P48764 MIR4785-201ENST00000585005 73 ntBASIC16.59■□□□□ 0.25
SLC9A3P48764 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC9A3P48764 Z99916.2-201ENST00000604037 246 ntBASIC16.59■□□□□ 0.25
SLC9A3P48764 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC9A3P48764 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC9A3P48764 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC9A3P48764 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC9A3P48764 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms