Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HADHAP40939 AC020916.1-201ENST00000587762 1774 ntBASIC18.32■□□□□ 0.52
HADHAP40939 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHAP40939 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HADHAP40939 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HADHAP40939 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HADHAP40939 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.32■□□□□ 0.52
HADHAP40939 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.32■□□□□ 0.52
HADHAP40939 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.32■□□□□ 0.52
HADHAP40939 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HADHAP40939 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HADHAP40939 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
HADHAP40939 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HADHAP40939 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHAP40939 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
HADHAP40939 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.32■□□□□ 0.52
HADHAP40939 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.32■□□□□ 0.52
HADHAP40939 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHAP40939 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHAP40939 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHAP40939 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 AC099343.3-201ENST00000605834 2503 ntBASIC18.31■□□□□ 0.52
HADHAP40939 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HADHAP40939 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.31■□□□□ 0.52
HADHAP40939 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.31■□□□□ 0.52
HADHAP40939 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 YBX1P2-201ENST00000489612 999 ntBASIC18.31■□□□□ 0.52
HADHAP40939 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.31■□□□□ 0.52
HADHAP40939 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HADHAP40939 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.31■□□□□ 0.52
HADHAP40939 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.31■□□□□ 0.52
HADHAP40939 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.31■□□□□ 0.52
HADHAP40939 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.31■□□□□ 0.52
HADHAP40939 AC008687.5-201ENST00000593746 558 ntBASIC18.31■□□□□ 0.52
HADHAP40939 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HADHAP40939 AC139887.4-201ENST00000607877 719 ntBASIC18.31■□□□□ 0.52
HADHAP40939 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.31■□□□□ 0.52
HADHAP40939 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HADHAP40939 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HADHAP40939 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HADHAP40939 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.31■□□□□ 0.52
HADHAP40939 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.31■□□□□ 0.52
HADHAP40939 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHAP40939 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.3■□□□□ 0.52
HADHAP40939 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
HADHAP40939 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.3■□□□□ 0.52
HADHAP40939 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 AL096828.2-201ENST00000567259 1965 ntBASIC18.3■□□□□ 0.52
HADHAP40939 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HADHAP40939 PVRIG2P-201ENST00000435460 978 ntBASIC18.3■□□□□ 0.52
HADHAP40939 KRT18P57-201ENST00000443599 1254 ntBASIC18.3■□□□□ 0.52
HADHAP40939 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 AL441883.1-201ENST00000566170 1045 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms