Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.64■□□□□ 0.89
COPB2P35606 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.63■□□□□ 0.89
COPB2P35606 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
COPB2P35606 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.63■□□□□ 0.89
COPB2P35606 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.63■□□□□ 0.89
COPB2P35606 MIR574-201ENST00000385209 96 ntBASIC20.63■□□□□ 0.89
COPB2P35606 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 KRT18P58-201ENST00000527480 1120 ntBASIC20.63■□□□□ 0.89
COPB2P35606 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.63■□□□□ 0.89
COPB2P35606 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.63■□□□□ 0.89
COPB2P35606 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.63■□□□□ 0.89
COPB2P35606 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.63■□□□□ 0.89
COPB2P35606 FAM215A-202ENST00000632077 792 ntBASIC20.63■□□□□ 0.89
COPB2P35606 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPB2P35606 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COPB2P35606 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.63■□□□□ 0.89
COPB2P35606 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.63■□□□□ 0.89
COPB2P35606 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.63■□□□□ 0.89
COPB2P35606 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.63■□□□□ 0.89
COPB2P35606 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.63■□□□□ 0.89
COPB2P35606 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPB2P35606 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPB2P35606 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPB2P35606 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.62■□□□□ 0.89
COPB2P35606 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.62■□□□□ 0.89
COPB2P35606 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.62■□□□□ 0.89
COPB2P35606 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.62■□□□□ 0.89
COPB2P35606 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COPB2P35606 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.62■□□□□ 0.89
COPB2P35606 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.62■□□□□ 0.89
COPB2P35606 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.62■□□□□ 0.89
COPB2P35606 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.62■□□□□ 0.89
COPB2P35606 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.62■□□□□ 0.89
COPB2P35606 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.62■□□□□ 0.89
COPB2P35606 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.62■□□□□ 0.89
COPB2P35606 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
COPB2P35606 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
COPB2P35606 MIR7706-201ENST00000613747 67 ntBASIC20.62■□□□□ 0.89
COPB2P35606 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.62■□□□□ 0.89
COPB2P35606 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPB2P35606 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPB2P35606 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.62■□□□□ 0.89
COPB2P35606 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.62■□□□□ 0.89
COPB2P35606 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPB2P35606 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COPB2P35606 AL499627.1-201ENST00000569373 2188 ntBASIC20.62■□□□□ 0.89
COPB2P35606 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPB2P35606 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.62■□□□□ 0.89
COPB2P35606 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPB2P35606 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COPB2P35606 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COPB2P35606 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.61■□□□□ 0.89
COPB2P35606 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COPB2P35606 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.61■□□□□ 0.89
COPB2P35606 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COPB2P35606 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COPB2P35606 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.61■□□□□ 0.89
COPB2P35606 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.61■□□□□ 0.89
COPB2P35606 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COPB2P35606 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 AC106730.1-201ENST00000566722 1090 ntBASIC20.61■□□□□ 0.89
COPB2P35606 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
COPB2P35606 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.61■□□□□ 0.89
COPB2P35606 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
COPB2P35606 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
COPB2P35606 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.61■□□□□ 0.89
COPB2P35606 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.61■□□□□ 0.89
COPB2P35606 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPB2P35606 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COPB2P35606 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPB2P35606 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COPB2P35606 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPB2P35606 AC243591.1-201ENST00000452967 1364 ntBASIC20.6■□□□□ 0.89
COPB2P35606 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COPB2P35606 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPB2P35606 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPB2P35606 AC120498.9-201ENST00000339021 3867 ntBASIC20.6■□□□□ 0.89
COPB2P35606 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPB2P35606 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.6■□□□□ 0.89
COPB2P35606 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms