Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
RAB4AP20338 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB4AP20338 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB4AP20338 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB4AP20338 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RAB4AP20338 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.9□□□□□ -0.19
RAB4AP20338 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB4AP20338 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB4AP20338 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB4AP20338 TFP1-202ENST00000475455 1573 ntBASIC13.89□□□□□ -0.19
RAB4AP20338 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB4AP20338 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RAB4AP20338 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB4AP20338 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAB4AP20338 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB4AP20338 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB4AP20338 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.89□□□□□ -0.19
RAB4AP20338 KRT18P14-201ENST00000534205 1250 ntBASIC13.89□□□□□ -0.19
RAB4AP20338 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB4AP20338 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB4AP20338 AC131212.1-201ENST00000613771 668 ntBASIC13.89□□□□□ -0.19
RAB4AP20338 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB4AP20338 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RAB4AP20338 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 FEM1AP3-201ENST00000403722 1741 ntBASIC13.89□□□□□ -0.19
RAB4AP20338 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RAB4AP20338 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
RAB4AP20338 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.89□□□□□ -0.19
RAB4AP20338 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RAB4AP20338 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB4AP20338 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB4AP20338 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB4AP20338 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB4AP20338 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB4AP20338 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAB4AP20338 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB4AP20338 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAB4AP20338 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB4AP20338 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.88□□□□□ -0.19
RAB4AP20338 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.88□□□□□ -0.19
RAB4AP20338 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
RAB4AP20338 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
RAB4AP20338 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB4AP20338 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB4AP20338 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB4AP20338 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB4AP20338 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms