Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 MIR1224-201ENST00000408193 85 ntBASIC18.27■□□□□ 0.52
HLA-DPA1P20036 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 HYMAI.1-201ENST00000620949 238 ntBASIC18.27■□□□□ 0.52
HLA-DPA1P20036 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DPA1P20036 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DPA1P20036 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DPA1P20036 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DPA1P20036 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DPA1P20036 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 LINC00167-201ENST00000530583 1419 ntBASIC18.26■□□□□ 0.51
HLA-DPA1P20036 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 SLC25A6P5-201ENST00000435663 894 ntBASIC18.26■□□□□ 0.51
HLA-DPA1P20036 DUTP2-201ENST00000519164 463 ntBASIC18.26■□□□□ 0.51
HLA-DPA1P20036 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 AC010331.1-201ENST00000611423 582 ntBASIC18.26■□□□□ 0.51
HLA-DPA1P20036 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DPA1P20036 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 AC132938.6-201ENST00000623828 1655 ntBASIC18.25■□□□□ 0.51
HLA-DPA1P20036 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 LINC01311-201ENST00000565162 1445 ntBASIC18.25■□□□□ 0.51
HLA-DPA1P20036 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 MIR662-201ENST00000384847 95 ntBASIC18.25■□□□□ 0.51
HLA-DPA1P20036 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 AL049597.2-201ENST00000565575 961 ntBASIC18.25■□□□□ 0.51
HLA-DPA1P20036 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.25■□□□□ 0.51
HLA-DPA1P20036 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPA1P20036 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms