Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VCLP18206 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCLP18206 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.21■□□□□ 0.51
VCLP18206 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCLP18206 RASA4DP-201ENST00000460726 1199 ntBASIC18.21■□□□□ 0.51
VCLP18206 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.21■□□□□ 0.51
VCLP18206 KRT18P41-201ENST00000518924 1277 ntBASIC18.21■□□□□ 0.51
VCLP18206 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.21■□□□□ 0.51
VCLP18206 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.21■□□□□ 0.51
VCLP18206 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
VCLP18206 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VCLP18206 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.21■□□□□ 0.51
VCLP18206 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.21■□□□□ 0.51
VCLP18206 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCLP18206 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCLP18206 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCLP18206 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.21■□□□□ 0.51
VCLP18206 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCLP18206 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.21■□□□□ 0.51
VCLP18206 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCLP18206 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
VCLP18206 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.21■□□□□ 0.51
VCLP18206 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCLP18206 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
VCLP18206 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.21■□□□□ 0.5
VCLP18206 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.2■□□□□ 0.5
VCLP18206 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.2■□□□□ 0.5
VCLP18206 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.2■□□□□ 0.5
VCLP18206 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
VCLP18206 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.2■□□□□ 0.5
VCLP18206 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VCLP18206 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.2■□□□□ 0.5
VCLP18206 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.2■□□□□ 0.5
VCLP18206 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.2■□□□□ 0.5
VCLP18206 MIR3917-201ENST00000580971 93 ntBASIC18.2■□□□□ 0.5
VCLP18206 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
VCLP18206 AC010240.3-201ENST00000607688 395 ntBASIC18.2■□□□□ 0.5
VCLP18206 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VCLP18206 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VCLP18206 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VCLP18206 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.2■□□□□ 0.5
VCLP18206 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VCLP18206 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.2■□□□□ 0.5
VCLP18206 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.2■□□□□ 0.5
VCLP18206 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCLP18206 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.19■□□□□ 0.5
VCLP18206 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.19■□□□□ 0.5
VCLP18206 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
VCLP18206 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
VCLP18206 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.19■□□□□ 0.5
VCLP18206 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.19■□□□□ 0.5
VCLP18206 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.19■□□□□ 0.5
VCLP18206 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.19■□□□□ 0.5
VCLP18206 AL671277.2-201ENST00000458060 996 ntBASIC18.19■□□□□ 0.5
VCLP18206 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.19■□□□□ 0.5
VCLP18206 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.19■□□□□ 0.5
VCLP18206 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.19■□□□□ 0.5
VCLP18206 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.19■□□□□ 0.5
VCLP18206 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.19■□□□□ 0.5
VCLP18206 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCLP18206 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCLP18206 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCLP18206 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCLP18206 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.18■□□□□ 0.5
VCLP18206 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.18■□□□□ 0.5
VCLP18206 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VCLP18206 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VCLP18206 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.18■□□□□ 0.5
VCLP18206 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VCLP18206 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms