Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TOP1P11387 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
TOP1P11387 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TOP1P11387 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TOP1P11387 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TOP1P11387 CLEC4GP1-201ENST00000596555 870 ntBASIC21.23■□□□□ 0.99
TOP1P11387 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TOP1P11387 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.23■□□□□ 0.99
TOP1P11387 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.23■□□□□ 0.99
TOP1P11387 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TOP1P11387 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
TOP1P11387 AC090164.3-201ENST00000610780 2143 ntBASIC21.23■□□□□ 0.99
TOP1P11387 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TOP1P11387 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TOP1P11387 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TOP1P11387 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.23■□□□□ 0.99
TOP1P11387 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TOP1P11387 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TOP1P11387 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TOP1P11387 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.23■□□□□ 0.99
TOP1P11387 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TOP1P11387 AC135050.7-201ENST00000624508 2218 ntBASIC21.23■□□□□ 0.99
TOP1P11387 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.22■□□□□ 0.99
TOP1P11387 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.22■□□□□ 0.99
TOP1P11387 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TOP1P11387 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.22■□□□□ 0.99
TOP1P11387 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.22■□□□□ 0.99
TOP1P11387 TSPY12P-201ENST00000421279 868 ntBASIC21.22■□□□□ 0.99
TOP1P11387 LINC00265-3P-201ENST00000447588 903 ntBASIC21.22■□□□□ 0.99
TOP1P11387 TOB2P1-201ENST00000469761 992 ntBASIC21.22■□□□□ 0.99
TOP1P11387 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.22■□□□□ 0.99
TOP1P11387 MIR3652-201ENST00000579335 131 ntBASIC21.22■□□□□ 0.99
TOP1P11387 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.22■□□□□ 0.99
TOP1P11387 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.22■□□□□ 0.99
TOP1P11387 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
TOP1P11387 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.22■□□□□ 0.99
TOP1P11387 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.22■□□□□ 0.99
TOP1P11387 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
TOP1P11387 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TOP1P11387 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
TOP1P11387 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.22■□□□□ 0.99
TOP1P11387 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TOP1P11387 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.21■□□□□ 0.99
TOP1P11387 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 LINC00602-201ENST00000629776 2065 ntBASIC21.21■□□□□ 0.99
TOP1P11387 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.21■□□□□ 0.99
TOP1P11387 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.21■□□□□ 0.99
TOP1P11387 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.21■□□□□ 0.99
TOP1P11387 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.21■□□□□ 0.99
TOP1P11387 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.21■□□□□ 0.99
TOP1P11387 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.21■□□□□ 0.99
TOP1P11387 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.21■□□□□ 0.99
TOP1P11387 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.21■□□□□ 0.99
TOP1P11387 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOP1P11387 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TOP1P11387 LINC00167-201ENST00000530583 1419 ntBASIC21.21■□□□□ 0.99
TOP1P11387 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.2■□□□□ 0.99
TOP1P11387 AC090340.1-201ENST00000620778 4980 ntBASIC21.2■□□□□ 0.99
TOP1P11387 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TOP1P11387 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
TOP1P11387 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TOP1P11387 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TOP1P11387 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TOP1P11387 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TOP1P11387 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TOP1P11387 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TOP1P11387 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.2■□□□□ 0.98
TOP1P11387 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TOP1P11387 DUSP5P1-201ENST00000441325 1139 ntBASIC21.2■□□□□ 0.98
TOP1P11387 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.2■□□□□ 0.98
TOP1P11387 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.2■□□□□ 0.98
TOP1P11387 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TOP1P11387 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms