Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM17P0DL12 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 CROCCP5-201ENST00000436658 830 ntBASIC13.51□□□□□ -0.25
SMIM17P0DL12 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 C1QL1P1-201ENST00000568105 661 ntBASIC13.51□□□□□ -0.25
SMIM17P0DL12 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM17P0DL12 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM17P0DL12 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 AC018695.7-201ENST00000624587 2492 ntBASIC13.5□□□□□ -0.25
SMIM17P0DL12 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 AL138781.1-201ENST00000566567 1274 ntBASIC13.5□□□□□ -0.25
SMIM17P0DL12 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 AL365209.1-201ENST00000624418 6473 ntBASIC13.5□□□□□ -0.25
SMIM17P0DL12 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.5□□□□□ -0.25
SMIM17P0DL12 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM17P0DL12 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms