Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 AC012618.2-201ENST00000428058 849 ntBASIC17.55■□□□□ 0.4
LINGO3P0C6S8 KSR1P1-201ENST00000446298 240 ntBASIC17.55■□□□□ 0.4
LINGO3P0C6S8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 RPS2P4-201ENST00000476944 856 ntBASIC17.55■□□□□ 0.4
LINGO3P0C6S8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 AC233702.5-201ENST00000584107 538 ntBASIC17.55■□□□□ 0.4
LINGO3P0C6S8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINGO3P0C6S8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 AC008550.1-201ENST00000511500 884 ntBASIC17.54■□□□□ 0.4
LINGO3P0C6S8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 Z99916.2-201ENST00000604037 246 ntBASIC17.54■□□□□ 0.4
LINGO3P0C6S8 AC073195.1-201ENST00000607241 877 ntBASIC17.54■□□□□ 0.4
LINGO3P0C6S8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 AP006294.2-201ENST00000641667 209 ntBASIC17.54■□□□□ 0.4
LINGO3P0C6S8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 AL136379.1-201ENST00000623471 2642 ntBASIC17.54■□□□□ 0.4
LINGO3P0C6S8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.54■□□□□ 0.4
LINGO3P0C6S8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.53■□□□□ 0.4
LINGO3P0C6S8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LINGO3P0C6S8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.52■□□□□ 0.4
LINGO3P0C6S8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms