Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AL096828.2-201ENST00000567259 1965 ntBASIC19.77■□□□□ 0.75
COL1A2P08123 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL1A2P08123 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL1A2P08123 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL1A2P08123 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
COL1A2P08123 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
COL1A2P08123 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL1A2P08123 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.76■□□□□ 0.75
COL1A2P08123 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 AL022342.1-201ENST00000400363 863 ntBASIC19.76■□□□□ 0.75
COL1A2P08123 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
COL1A2P08123 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.76■□□□□ 0.75
COL1A2P08123 AL139288.1-201ENST00000623748 933 ntBASIC19.76■□□□□ 0.75
COL1A2P08123 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 AL138781.2-201ENST00000617896 1843 ntBASIC19.76■□□□□ 0.75
COL1A2P08123 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.76■□□□□ 0.75
COL1A2P08123 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.76■□□□□ 0.75
COL1A2P08123 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL1A2P08123 TNXA-203ENST00000507684 2038 ntBASIC19.76■□□□□ 0.75
COL1A2P08123 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
COL1A2P08123 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A2P08123 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.76■□□□□ 0.75
COL1A2P08123 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
COL1A2P08123 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.75■□□□□ 0.75
COL1A2P08123 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.75■□□□□ 0.75
COL1A2P08123 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.75■□□□□ 0.75
COL1A2P08123 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.75■□□□□ 0.75
COL1A2P08123 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.75■□□□□ 0.75
COL1A2P08123 AP000347.1-202ENST00000435868 847 ntBASIC19.75■□□□□ 0.75
COL1A2P08123 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.75■□□□□ 0.75
COL1A2P08123 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COL1A2P08123 AC079776.4-201ENST00000511039 504 ntBASIC19.75■□□□□ 0.75
COL1A2P08123 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.75■□□□□ 0.75
COL1A2P08123 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.75■□□□□ 0.75
COL1A2P08123 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.75■□□□□ 0.75
COL1A2P08123 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 BX640515.1-201ENST00000617215 977 ntBASIC19.75■□□□□ 0.75
COL1A2P08123 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.75■□□□□ 0.75
COL1A2P08123 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
COL1A2P08123 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 AC010460.3-201ENST00000511359 1579 ntBASIC19.75■□□□□ 0.75
COL1A2P08123 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.75■□□□□ 0.75
COL1A2P08123 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.75■□□□□ 0.75
COL1A2P08123 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A2P08123 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.74■□□□□ 0.75
COL1A2P08123 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
COL1A2P08123 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL1A2P08123 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.74■□□□□ 0.75
COL1A2P08123 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
COL1A2P08123 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL1A2P08123 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL1A2P08123 RNPS1P1-201ENST00000507437 918 ntBASIC19.74■□□□□ 0.75
COL1A2P08123 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.74■□□□□ 0.75
COL1A2P08123 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COL1A2P08123 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.74■□□□□ 0.75
COL1A2P08123 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.74■□□□□ 0.75
COL1A2P08123 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.74■□□□□ 0.75
COL1A2P08123 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.74■□□□□ 0.75
COL1A2P08123 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.74■□□□□ 0.75
COL1A2P08123 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 AC148477.8-201ENST00000624298 468 ntBASIC19.74■□□□□ 0.75
COL1A2P08123 AP000867.4-201ENST00000641616 219 ntBASIC19.74■□□□□ 0.75
COL1A2P08123 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 AC093503.3-201ENST00000624917 2352 ntBASIC19.74■□□□□ 0.75
COL1A2P08123 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COL1A2P08123 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A2P08123 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.74■□□□□ 0.75
COL1A2P08123 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms