Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.83■□□□□ 0.44
CAPN1P07384 AL121956.5-201ENST00000625261 221 ntBASIC17.83■□□□□ 0.44
CAPN1P07384 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN1P07384 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.83■□□□□ 0.44
CAPN1P07384 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 AC138028.4-201ENST00000564984 1845 ntBASIC17.83■□□□□ 0.44
CAPN1P07384 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 GMCL1P1-201ENST00000463439 1581 ntBASIC17.83■□□□□ 0.44
CAPN1P07384 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.83■□□□□ 0.44
CAPN1P07384 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPN1P07384 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN1P07384 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
CAPN1P07384 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPN1P07384 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
CAPN1P07384 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPN1P07384 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN1P07384 AP000523.1-201ENST00000398242 1049 ntBASIC17.82■□□□□ 0.44
CAPN1P07384 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CAPN1P07384 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.82■□□□□ 0.44
CAPN1P07384 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.82■□□□□ 0.44
CAPN1P07384 GCSHP2-201ENST00000560971 527 ntBASIC17.82■□□□□ 0.44
CAPN1P07384 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPN1P07384 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN1P07384 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN1P07384 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN1P07384 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN1P07384 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPN1P07384 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN1P07384 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN1P07384 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CAPN1P07384 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN1P07384 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN1P07384 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CAPN1P07384 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CAPN1P07384 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPN1P07384 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CAPN1P07384 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CAPN1P07384 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPN1P07384 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.81■□□□□ 0.44
CAPN1P07384 AL671277.2-201ENST00000458060 996 ntBASIC17.81■□□□□ 0.44
CAPN1P07384 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPN1P07384 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPN1P07384 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN1P07384 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.81■□□□□ 0.44
CAPN1P07384 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.81■□□□□ 0.44
CAPN1P07384 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CAPN1P07384 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN1P07384 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPN1P07384 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN1P07384 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN1P07384 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPN1P07384 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CAPN1P07384 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPN1P07384 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.8■□□□□ 0.44
CAPN1P07384 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms