Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 DUTP2-201ENST00000519164 463 ntBASIC18.36■□□□□ 0.53
HLA-DQB2P05538 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 AC005332.3-201ENST00000589904 676 ntBASIC18.36■□□□□ 0.53
HLA-DQB2P05538 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 GPR32P1-201ENST00000601788 811 ntBASIC18.35■□□□□ 0.53
HLA-DQB2P05538 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 AL390719.2-201ENST00000606993 987 ntBASIC18.35■□□□□ 0.53
HLA-DQB2P05538 AL590326.2-201ENST00000625139 305 ntBASIC18.35■□□□□ 0.53
HLA-DQB2P05538 AC068880.1-201ENST00000507289 2297 ntBASIC18.35■□□□□ 0.53
HLA-DQB2P05538 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB2P05538 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.34■□□□□ 0.53
HLA-DQB2P05538 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 AC100803.2-201ENST00000562459 1963 ntBASIC18.34■□□□□ 0.53
HLA-DQB2P05538 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 Z83836.1-201ENST00000624605 1642 ntBASIC18.34■□□□□ 0.53
HLA-DQB2P05538 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB2P05538 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQB2P05538 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQB2P05538 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.33■□□□□ 0.53
HLA-DQB2P05538 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HLA-DQB2P05538 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQB2P05538 AL353692.3-201ENST00000407031 1396 ntBASIC18.33■□□□□ 0.53
HLA-DQB2P05538 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQB2P05538 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQB2P05538 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQB2P05538 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.33■□□□□ 0.53
HLA-DQB2P05538 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DQB2P05538 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms