Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.73■■□□□ 1.07
CHGBP05060 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.73■■□□□ 1.07
CHGBP05060 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.73■■□□□ 1.07
CHGBP05060 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CHGBP05060 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 AC233702.3-201ENST00000578656 1387 ntBASIC21.73■■□□□ 1.07
CHGBP05060 KRT8P47-201ENST00000604727 1398 ntBASIC21.73■■□□□ 1.07
CHGBP05060 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.73■■□□□ 1.07
CHGBP05060 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CHGBP05060 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CHGBP05060 DUSP5P1-201ENST00000441325 1139 ntBASIC21.72■■□□□ 1.07
CHGBP05060 AP000867.3-201ENST00000524675 377 ntBASIC21.72■■□□□ 1.07
CHGBP05060 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.72■■□□□ 1.07
CHGBP05060 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.72■■□□□ 1.07
CHGBP05060 AC090616.6-201ENST00000582640 721 ntBASIC21.72■■□□□ 1.07
CHGBP05060 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.72■■□□□ 1.07
CHGBP05060 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CHGBP05060 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.72■■□□□ 1.07
CHGBP05060 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CHGBP05060 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CHGBP05060 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.72■■□□□ 1.07
CHGBP05060 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.72■■□□□ 1.07
CHGBP05060 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CHGBP05060 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.72■■□□□ 1.07
CHGBP05060 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHGBP05060 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.72■■□□□ 1.07
CHGBP05060 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CHGBP05060 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.71■■□□□ 1.07
CHGBP05060 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CHGBP05060 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.71■■□□□ 1.07
CHGBP05060 MTCL1P1-201ENST00000446207 792 ntBASIC21.71■■□□□ 1.07
CHGBP05060 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.71■■□□□ 1.07
CHGBP05060 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CHGBP05060 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.71■■□□□ 1.07
CHGBP05060 AL353801.3-201ENST00000609898 542 ntBASIC21.71■■□□□ 1.07
CHGBP05060 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.71■■□□□ 1.07
CHGBP05060 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CHGBP05060 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CHGBP05060 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.71■■□□□ 1.07
CHGBP05060 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHGBP05060 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CHGBP05060 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.7■■□□□ 1.06
CHGBP05060 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.7■■□□□ 1.06
CHGBP05060 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.7■■□□□ 1.06
CHGBP05060 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.7■■□□□ 1.06
CHGBP05060 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.7■■□□□ 1.06
CHGBP05060 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CHGBP05060 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.7■■□□□ 1.06
CHGBP05060 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHGBP05060 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHGBP05060 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHGBP05060 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CHGBP05060 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CHGBP05060 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHGBP05060 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHGBP05060 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
CHGBP05060 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms