Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE6O95741 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE6O95741 FAAHP1-202ENST00000446499 1238 ntBASIC17.76■□□□□ 0.43
CPNE6O95741 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE6O95741 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.76■□□□□ 0.43
CPNE6O95741 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE6O95741 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.76■□□□□ 0.43
CPNE6O95741 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.76■□□□□ 0.43
CPNE6O95741 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.76■□□□□ 0.43
CPNE6O95741 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE6O95741 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE6O95741 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE6O95741 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE6O95741 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE6O95741 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE6O95741 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE6O95741 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE6O95741 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE6O95741 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 AL357033.4-201ENST00000617703 1807 ntBASIC17.75■□□□□ 0.43
CPNE6O95741 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE6O95741 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE6O95741 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CPNE6O95741 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE6O95741 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE6O95741 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 PRORSD1P-202ENST00000563365 2154 ntBASIC17.75■□□□□ 0.43
CPNE6O95741 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE6O95741 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 IGHGP-201ENST00000390555 1178 ntBASIC17.75■□□□□ 0.43
CPNE6O95741 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE6O95741 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE6O95741 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE6O95741 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE6O95741 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE6O95741 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE6O95741 AL121772.3-201ENST00000610840 674 ntBASIC17.75■□□□□ 0.43
CPNE6O95741 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPNE6O95741 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CPNE6O95741 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPNE6O95741 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CPNE6O95741 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE6O95741 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE6O95741 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CPNE6O95741 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE6O95741 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CPNE6O95741 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 TSPY19P-201ENST00000418461 509 ntBASIC17.74■□□□□ 0.43
CPNE6O95741 AL845331.1-201ENST00000424978 1190 ntBASIC17.74■□□□□ 0.43
CPNE6O95741 TSPY18P-201ENST00000441642 509 ntBASIC17.74■□□□□ 0.43
CPNE6O95741 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE6O95741 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.74■□□□□ 0.43
CPNE6O95741 LINC01711-201ENST00000598340 967 ntBASIC17.74■□□□□ 0.43
CPNE6O95741 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE6O95741 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE6O95741 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE6O95741 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE6O95741 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms