Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SIX6O95475 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SIX6O95475 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SIX6O95475 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SIX6O95475 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.17■□□□□ 0.02
SIX6O95475 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.17■□□□□ 0.02
SIX6O95475 GMCL1P1-201ENST00000463439 1581 ntBASIC15.17■□□□□ 0.02
SIX6O95475 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.17■□□□□ 0.02
SIX6O95475 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.17■□□□□ 0.02
SIX6O95475 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.17■□□□□ 0.02
SIX6O95475 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.17■□□□□ 0.02
SIX6O95475 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SIX6O95475 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.17■□□□□ 0.02
SIX6O95475 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SIX6O95475 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
SIX6O95475 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.16■□□□□ 0.02
SIX6O95475 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.16■□□□□ 0.02
SIX6O95475 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SIX6O95475 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.16■□□□□ 0.02
SIX6O95475 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.16■□□□□ 0.02
SIX6O95475 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.16■□□□□ 0.02
SIX6O95475 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.16■□□□□ 0.02
SIX6O95475 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.16■□□□□ 0.02
SIX6O95475 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SIX6O95475 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
SIX6O95475 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.16■□□□□ 0.02
SIX6O95475 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SIX6O95475 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SIX6O95475 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIX6O95475 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.15■□□□□ 0.02
SIX6O95475 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SIX6O95475 AC099343.3-201ENST00000605834 2503 ntBASIC15.15■□□□□ 0.02
SIX6O95475 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SIX6O95475 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.15■□□□□ 0.02
SIX6O95475 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.15■□□□□ 0.02
SIX6O95475 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.15■□□□□ 0.02
SIX6O95475 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.15■□□□□ 0.02
SIX6O95475 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.15■□□□□ 0.02
SIX6O95475 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SIX6O95475 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.15■□□□□ 0.02
SIX6O95475 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 LSM12P1-201ENST00000411836 588 ntBASIC15.15■□□□□ 0.02
SIX6O95475 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.15■□□□□ 0.02
SIX6O95475 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 DUX4L16-201ENST00000555130 1264 ntBASIC15.15■□□□□ 0.02
SIX6O95475 AL160286.2-201ENST00000567150 934 ntBASIC15.15■□□□□ 0.02
SIX6O95475 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.15■□□□□ 0.02
SIX6O95475 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 AC131212.1-201ENST00000613771 668 ntBASIC15.15■□□□□ 0.02
SIX6O95475 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SIX6O95475 AL121906.2-201ENST00000621597 723 ntBASIC15.15■□□□□ 0.02
SIX6O95475 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.15■□□□□ 0.02
SIX6O95475 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SIX6O95475 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms