Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.71■□□□□ 0.27
NKX2-2O95096 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.71■□□□□ 0.27
NKX2-2O95096 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.71■□□□□ 0.27
NKX2-2O95096 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
NKX2-2O95096 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.71■□□□□ 0.27
NKX2-2O95096 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.71■□□□□ 0.27
NKX2-2O95096 AL671277.2-201ENST00000458060 996 ntBASIC16.71■□□□□ 0.27
NKX2-2O95096 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.71■□□□□ 0.27
NKX2-2O95096 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.71■□□□□ 0.27
NKX2-2O95096 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.71■□□□□ 0.27
NKX2-2O95096 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.71■□□□□ 0.27
NKX2-2O95096 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.71■□□□□ 0.27
NKX2-2O95096 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
NKX2-2O95096 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NKX2-2O95096 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
NKX2-2O95096 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.7■□□□□ 0.26
NKX2-2O95096 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX2-2O95096 FAM210CP-201ENST00000445714 574 ntBASIC16.7■□□□□ 0.26
NKX2-2O95096 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.7■□□□□ 0.26
NKX2-2O95096 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.7■□□□□ 0.26
NKX2-2O95096 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.7■□□□□ 0.26
NKX2-2O95096 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX2-2O95096 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.7■□□□□ 0.26
NKX2-2O95096 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NKX2-2O95096 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NKX2-2O95096 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NKX2-2O95096 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.7■□□□□ 0.26
NKX2-2O95096 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NKX2-2O95096 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX2-2O95096 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NKX2-2O95096 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX2-2O95096 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NKX2-2O95096 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
NKX2-2O95096 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.69■□□□□ 0.26
NKX2-2O95096 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.69■□□□□ 0.26
NKX2-2O95096 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.69■□□□□ 0.26
NKX2-2O95096 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX2-2O95096 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX2-2O95096 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX2-2O95096 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.69■□□□□ 0.26
NKX2-2O95096 GPR32P1-201ENST00000601788 811 ntBASIC16.69■□□□□ 0.26
NKX2-2O95096 AC009154.2-201ENST00000621177 724 ntBASIC16.69■□□□□ 0.26
NKX2-2O95096 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX2-2O95096 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NKX2-2O95096 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX2-2O95096 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX2-2O95096 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX2-2O95096 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NKX2-2O95096 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.68■□□□□ 0.26
NKX2-2O95096 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NKX2-2O95096 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms