Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.96■□□□□ 0.63
BEST1O76090 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.96■□□□□ 0.63
BEST1O76090 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.96■□□□□ 0.63
BEST1O76090 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
BEST1O76090 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 NSUN5P1-202ENST00000421140 1535 ntBASIC18.96■□□□□ 0.63
BEST1O76090 NSUN5P2-203ENST00000457352 1529 ntBASIC18.96■□□□□ 0.63
BEST1O76090 AC135050.7-201ENST00000624508 2218 ntBASIC18.96■□□□□ 0.63
BEST1O76090 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.96■□□□□ 0.63
BEST1O76090 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.96■□□□□ 0.63
BEST1O76090 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BEST1O76090 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.96■□□□□ 0.63
BEST1O76090 AC104819.1-201ENST00000504587 486 ntBASIC18.96■□□□□ 0.63
BEST1O76090 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.96■□□□□ 0.63
BEST1O76090 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BEST1O76090 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
BEST1O76090 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.96■□□□□ 0.63
BEST1O76090 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST1O76090 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.96■□□□□ 0.63
BEST1O76090 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BEST1O76090 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BEST1O76090 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
BEST1O76090 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BEST1O76090 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BEST1O76090 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
BEST1O76090 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.95■□□□□ 0.62
BEST1O76090 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BEST1O76090 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.95■□□□□ 0.62
BEST1O76090 FOSL1P1-201ENST00000511041 816 ntBASIC18.95■□□□□ 0.62
BEST1O76090 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.95■□□□□ 0.62
BEST1O76090 DUTP2-201ENST00000519164 463 ntBASIC18.95■□□□□ 0.62
BEST1O76090 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.95■□□□□ 0.62
BEST1O76090 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.95■□□□□ 0.62
BEST1O76090 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.95■□□□□ 0.62
BEST1O76090 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.95■□□□□ 0.62
BEST1O76090 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.95■□□□□ 0.62
BEST1O76090 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST1O76090 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.95■□□□□ 0.62
BEST1O76090 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.94■□□□□ 0.62
BEST1O76090 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.94■□□□□ 0.62
BEST1O76090 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
BEST1O76090 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.94■□□□□ 0.62
BEST1O76090 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
BEST1O76090 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 AC100803.2-201ENST00000562459 1963 ntBASIC18.94■□□□□ 0.62
BEST1O76090 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.94■□□□□ 0.62
BEST1O76090 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
BEST1O76090 NUS1P1-201ENST00000446295 882 ntBASIC18.94■□□□□ 0.62
BEST1O76090 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.94■□□□□ 0.62
BEST1O76090 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.94■□□□□ 0.62
BEST1O76090 PRELID1P1-202ENST00000567272 903 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms