Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PTP4A3O75365 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.31■□□□□ 0.2
PTP4A3O75365 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTP4A3O75365 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.31■□□□□ 0.2
PTP4A3O75365 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.31■□□□□ 0.2
PTP4A3O75365 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 MIR4497-201ENST00000583208 89 ntBASIC16.31■□□□□ 0.2
PTP4A3O75365 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.31■□□□□ 0.2
PTP4A3O75365 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.31■□□□□ 0.2
PTP4A3O75365 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PTP4A3O75365 PP12613-201ENST00000424958 2230 ntBASIC16.31■□□□□ 0.2
PTP4A3O75365 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTP4A3O75365 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTP4A3O75365 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.31■□□□□ 0.2
PTP4A3O75365 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.3■□□□□ 0.2
PTP4A3O75365 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PTP4A3O75365 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTP4A3O75365 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
PTP4A3O75365 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PTP4A3O75365 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.3■□□□□ 0.2
PTP4A3O75365 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
PTP4A3O75365 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PTP4A3O75365 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PTP4A3O75365 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
PTP4A3O75365 NEK4P2-201ENST00000580004 1012 ntBASIC16.3■□□□□ 0.2
PTP4A3O75365 MIR3917-201ENST00000580971 93 ntBASIC16.3■□□□□ 0.2
PTP4A3O75365 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 FAM87A-204ENST00000613235 858 ntBASIC16.3■□□□□ 0.2
PTP4A3O75365 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTP4A3O75365 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.3■□□□□ 0.2
PTP4A3O75365 SIRPAP1-201ENST00000448467 1770 ntBASIC16.3■□□□□ 0.2
PTP4A3O75365 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
PTP4A3O75365 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.3■□□□□ 0.2
PTP4A3O75365 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.3■□□□□ 0.2
PTP4A3O75365 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A3O75365 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PTP4A3O75365 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PTP4A3O75365 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTP4A3O75365 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.29■□□□□ 0.2
PTP4A3O75365 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.29■□□□□ 0.2
PTP4A3O75365 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 MMP23A-201ENST00000234610 1017 ntBASIC16.29■□□□□ 0.2
PTP4A3O75365 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.29■□□□□ 0.2
PTP4A3O75365 NAPSB-206ENST00000562112 1266 ntBASIC16.29■□□□□ 0.2
PTP4A3O75365 AL512604.3-201ENST00000569583 964 ntBASIC16.29■□□□□ 0.2
PTP4A3O75365 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 AC100803.2-201ENST00000562459 1963 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms