Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF9O60383 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF9O60383 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GDF9O60383 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF9O60383 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.55■□□□□ 0.4
GDF9O60383 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF9O60383 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.55■□□□□ 0.4
GDF9O60383 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF9O60383 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.55■□□□□ 0.4
GDF9O60383 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.55■□□□□ 0.4
GDF9O60383 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.55■□□□□ 0.4
GDF9O60383 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.55■□□□□ 0.4
GDF9O60383 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF9O60383 AC006557.2-201ENST00000592985 1240 ntBASIC17.55■□□□□ 0.4
GDF9O60383 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 LINC00602-201ENST00000629776 2065 ntBASIC17.55■□□□□ 0.4
GDF9O60383 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.55■□□□□ 0.4
GDF9O60383 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GDF9O60383 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF9O60383 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF9O60383 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GDF9O60383 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GDF9O60383 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
GDF9O60383 AL139400.1-201ENST00000366220 510 ntBASIC17.54■□□□□ 0.4
GDF9O60383 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.54■□□□□ 0.4
GDF9O60383 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GDF9O60383 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GDF9O60383 MIR149-201ENST00000384879 89 ntBASIC17.54■□□□□ 0.4
GDF9O60383 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.54■□□□□ 0.4
GDF9O60383 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GDF9O60383 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GDF9O60383 CRYGEP-201ENST00000412192 528 ntBASIC17.54■□□□□ 0.4
GDF9O60383 TSEN15P1-201ENST00000423257 515 ntBASIC17.54■□□□□ 0.4
GDF9O60383 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.54■□□□□ 0.4
GDF9O60383 MKNK2P1-201ENST00000437526 628 ntBASIC17.54■□□□□ 0.4
GDF9O60383 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.54■□□□□ 0.4
GDF9O60383 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.54■□□□□ 0.4
GDF9O60383 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GDF9O60383 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.54■□□□□ 0.4
GDF9O60383 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.54■□□□□ 0.4
GDF9O60383 AC136632.2-201ENST00000512891 861 ntBASIC17.54■□□□□ 0.4
GDF9O60383 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.54■□□□□ 0.4
GDF9O60383 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF9O60383 AL022326.1-202ENST00000641533 845 ntBASIC17.54■□□□□ 0.4
GDF9O60383 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF9O60383 GPR89P-201ENST00000407924 1495 ntBASIC17.54■□□□□ 0.4
GDF9O60383 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF9O60383 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF9O60383 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.54■□□□□ 0.4
GDF9O60383 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF9O60383 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
GDF9O60383 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF9O60383 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
GDF9O60383 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.53■□□□□ 0.4
GDF9O60383 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
GDF9O60383 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.53■□□□□ 0.4
GDF9O60383 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.53■□□□□ 0.4
GDF9O60383 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.53■□□□□ 0.4
GDF9O60383 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.53■□□□□ 0.4
GDF9O60383 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.53■□□□□ 0.4
GDF9O60383 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.53■□□□□ 0.4
GDF9O60383 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF9O60383 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
GDF9O60383 AL031432.2-201ENST00000566714 459 ntBASIC17.53■□□□□ 0.4
GDF9O60383 AL928711.1-201ENST00000570165 459 ntBASIC17.53■□□□□ 0.4
GDF9O60383 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GDF9O60383 AC079776.2-201ENST00000641154 1609 ntBASIC17.53■□□□□ 0.4
GDF9O60383 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms