Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ACTN4O43707 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ACTN4O43707 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ACTN4O43707 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN4O43707 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.3■□□□□ 0.84
ACTN4O43707 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.3■□□□□ 0.84
ACTN4O43707 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
ACTN4O43707 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.3■□□□□ 0.84
ACTN4O43707 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.3■□□□□ 0.84
ACTN4O43707 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ACTN4O43707 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN4O43707 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN4O43707 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
ACTN4O43707 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN4O43707 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.3■□□□□ 0.84
ACTN4O43707 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN4O43707 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN4O43707 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.3■□□□□ 0.84
ACTN4O43707 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.3■□□□□ 0.84
ACTN4O43707 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN4O43707 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN4O43707 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
ACTN4O43707 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ACTN4O43707 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.3■□□□□ 0.84
ACTN4O43707 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN4O43707 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.3■□□□□ 0.84
ACTN4O43707 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.3■□□□□ 0.84
ACTN4O43707 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ACTN4O43707 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN4O43707 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN4O43707 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN4O43707 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN4O43707 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.29■□□□□ 0.84
ACTN4O43707 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.29■□□□□ 0.84
ACTN4O43707 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.29■□□□□ 0.84
ACTN4O43707 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.29■□□□□ 0.84
ACTN4O43707 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ACTN4O43707 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.29■□□□□ 0.84
ACTN4O43707 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN4O43707 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ACTN4O43707 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.29■□□□□ 0.84
ACTN4O43707 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ACTN4O43707 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.29■□□□□ 0.84
ACTN4O43707 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ACTN4O43707 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ACTN4O43707 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN4O43707 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ACTN4O43707 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.28■□□□□ 0.84
ACTN4O43707 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
ACTN4O43707 AP000523.1-201ENST00000398242 1049 ntBASIC20.28■□□□□ 0.84
ACTN4O43707 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.28■□□□□ 0.84
ACTN4O43707 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ACTN4O43707 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ACTN4O43707 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.28■□□□□ 0.84
ACTN4O43707 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.28■□□□□ 0.84
ACTN4O43707 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.28■□□□□ 0.84
ACTN4O43707 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ACTN4O43707 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ACTN4O43707 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN4O43707 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 PP12613-201ENST00000424958 2230 ntBASIC20.27■□□□□ 0.84
ACTN4O43707 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
ACTN4O43707 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN4O43707 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ACTN4O43707 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms