Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
MSH5O43196 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
MSH5O43196 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC24.65■■□□□ 1.54
MSH5O43196 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
MSH5O43196 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
MSH5O43196 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.65■■□□□ 1.54
MSH5O43196 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC24.64■■□□□ 1.54
MSH5O43196 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MSH5O43196 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.64■■□□□ 1.54
MSH5O43196 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MSH5O43196 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
MSH5O43196 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MSH5O43196 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MSH5O43196 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MSH5O43196 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MSH5O43196 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MSH5O43196 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC24.64■■□□□ 1.54
MSH5O43196 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
MSH5O43196 CCNB2P1-201ENST00000399411 1150 ntBASIC24.64■■□□□ 1.54
MSH5O43196 AL138729.1-201ENST00000406666 664 ntBASIC24.64■■□□□ 1.54
MSH5O43196 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC24.64■■□□□ 1.54
MSH5O43196 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC24.64■■□□□ 1.54
MSH5O43196 UNC93B7-201ENST00000509439 705 ntBASIC24.64■■□□□ 1.54
MSH5O43196 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC24.64■■□□□ 1.54
MSH5O43196 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
MSH5O43196 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.64■■□□□ 1.54
MSH5O43196 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC24.64■■□□□ 1.54
MSH5O43196 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
MSH5O43196 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC24.64■■□□□ 1.53
MSH5O43196 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
MSH5O43196 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
MSH5O43196 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
MSH5O43196 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
MSH5O43196 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
MSH5O43196 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
MSH5O43196 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
MSH5O43196 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
MSH5O43196 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MSH5O43196 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MSH5O43196 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC24.63■■□□□ 1.53
MSH5O43196 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MSH5O43196 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MSH5O43196 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC24.63■■□□□ 1.53
MSH5O43196 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC24.63■■□□□ 1.53
MSH5O43196 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC24.63■■□□□ 1.53
MSH5O43196 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC24.63■■□□□ 1.53
MSH5O43196 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
MSH5O43196 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC24.63■■□□□ 1.53
MSH5O43196 AC063944.3-201ENST00000609969 533 ntBASIC24.63■■□□□ 1.53
MSH5O43196 AC084781.1-201ENST00000613737 656 ntBASIC24.63■■□□□ 1.53
MSH5O43196 AC090373.1-201ENST00000623955 603 ntBASIC24.63■■□□□ 1.53
MSH5O43196 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
MSH5O43196 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
MSH5O43196 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC24.63■■□□□ 1.53
MSH5O43196 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
MSH5O43196 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
MSH5O43196 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC24.63■■□□□ 1.53
MSH5O43196 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MSH5O43196 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
MSH5O43196 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MSH5O43196 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
MSH5O43196 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
MSH5O43196 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC24.62■■□□□ 1.53
MSH5O43196 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC24.62■■□□□ 1.53
MSH5O43196 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MSH5O43196 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MSH5O43196 SPDYE15P-201ENST00000424157 909 ntBASIC24.62■■□□□ 1.53
MSH5O43196 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC24.62■■□□□ 1.53
MSH5O43196 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC24.62■■□□□ 1.53
MSH5O43196 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC24.62■■□□□ 1.53
MSH5O43196 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
MSH5O43196 AC006538.3-201ENST00000612495 578 ntBASIC24.62■■□□□ 1.53
MSH5O43196 MIR8084-201ENST00000614105 89 ntBASIC24.62■■□□□ 1.53
MSH5O43196 AC023511.2-201ENST00000618803 211 ntBASIC24.62■■□□□ 1.53
MSH5O43196 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
MSH5O43196 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC24.62■■□□□ 1.53
MSH5O43196 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
MSH5O43196 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MSH5O43196 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC24.62■■□□□ 1.53
MSH5O43196 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC24.62■■□□□ 1.53
MSH5O43196 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MSH5O43196 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.61■■□□□ 1.53
MSH5O43196 AC009053.2-201ENST00000563701 2365 ntBASIC24.61■■□□□ 1.53
MSH5O43196 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MSH5O43196 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC24.61■■□□□ 1.53
MSH5O43196 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
MSH5O43196 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
MSH5O43196 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.61■■□□□ 1.53
MSH5O43196 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MSH5O43196 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MSH5O43196 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MSH5O43196 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC24.61■■□□□ 1.53
MSH5O43196 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC24.61■■□□□ 1.53
MSH5O43196 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MSH5O43196 CNP-204ENST00000472031 1019 ntTSL 2 BASIC24.61■■□□□ 1.53
MSH5O43196 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MSH5O43196 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC24.61■■□□□ 1.53
MSH5O43196 RN7SL371P-201ENST00000578099 267 ntBASIC24.61■■□□□ 1.53
MSH5O43196 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
MSH5O43196 AC098617.1-207ENST00000594591 810 ntTSL 5 BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms