Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.99■■□□□ 1.27
ABCC4O15439 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
ABCC4O15439 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.99■■□□□ 1.27
ABCC4O15439 AP002469.2-201ENST00000531724 424 ntBASIC22.99■■□□□ 1.27
ABCC4O15439 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.99■■□□□ 1.27
ABCC4O15439 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.99■■□□□ 1.27
ABCC4O15439 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.99■■□□□ 1.27
ABCC4O15439 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.99■■□□□ 1.27
ABCC4O15439 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
ABCC4O15439 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCC4O15439 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.99■■□□□ 1.27
ABCC4O15439 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.98■■□□□ 1.27
ABCC4O15439 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.98■■□□□ 1.27
ABCC4O15439 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.98■■□□□ 1.27
ABCC4O15439 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.98■■□□□ 1.27
ABCC4O15439 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.98■■□□□ 1.27
ABCC4O15439 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
ABCC4O15439 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
ABCC4O15439 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.98■■□□□ 1.27
ABCC4O15439 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 AL592071.1-201ENST00000611956 408 ntBASIC22.98■■□□□ 1.27
ABCC4O15439 AC004263.2-201ENST00000617183 678 ntBASIC22.98■■□□□ 1.27
ABCC4O15439 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
ABCC4O15439 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
ABCC4O15439 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCC4O15439 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.98■■□□□ 1.27
ABCC4O15439 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.97■■□□□ 1.27
ABCC4O15439 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.97■■□□□ 1.27
ABCC4O15439 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.97■■□□□ 1.27
ABCC4O15439 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.97■■□□□ 1.27
ABCC4O15439 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.97■■□□□ 1.27
ABCC4O15439 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.97■■□□□ 1.27
ABCC4O15439 SLC25A6P4-201ENST00000586535 553 ntBASIC22.97■■□□□ 1.27
ABCC4O15439 AC099336.1-202ENST00000602961 463 ntBASIC22.97■■□□□ 1.27
ABCC4O15439 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.97■■□□□ 1.27
ABCC4O15439 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.97■■□□□ 1.27
ABCC4O15439 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 AP000997.3-201ENST00000623333 2250 ntBASIC22.97■■□□□ 1.27
ABCC4O15439 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.97■■□□□ 1.27
ABCC4O15439 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCC4O15439 LINC00602-201ENST00000629776 2065 ntBASIC22.97■■□□□ 1.27
ABCC4O15439 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.96■■□□□ 1.27
ABCC4O15439 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.96■■□□□ 1.27
ABCC4O15439 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 PXK-206ENST00000463280 2825 ntTSL 2 BASIC22.96■■□□□ 1.27
ABCC4O15439 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
ABCC4O15439 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 IGHV3-47-201ENST00000425060 335 ntBASIC22.96■■□□□ 1.27
ABCC4O15439 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.96■■□□□ 1.27
ABCC4O15439 KRT16P4-201ENST00000453883 522 ntBASIC22.96■■□□□ 1.27
ABCC4O15439 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.96■■□□□ 1.27
ABCC4O15439 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.96■■□□□ 1.27
ABCC4O15439 DUTP2-201ENST00000519164 463 ntBASIC22.96■■□□□ 1.27
ABCC4O15439 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
ABCC4O15439 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCC4O15439 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms