Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.21■□□□□ 0.35
CASQ2O14958 CYP2T1P-201ENST00000432607 1285 ntBASIC17.21■□□□□ 0.35
CASQ2O14958 RPS2P52-201ENST00000469610 820 ntBASIC17.21■□□□□ 0.35
CASQ2O14958 KRT18P41-201ENST00000518924 1277 ntBASIC17.21■□□□□ 0.35
CASQ2O14958 AL121906.2-201ENST00000621597 723 ntBASIC17.21■□□□□ 0.35
CASQ2O14958 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CASQ2O14958 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.21■□□□□ 0.35
CASQ2O14958 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CASQ2O14958 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 CROCCP2-202ENST00000412962 2773 ntBASIC17.21■□□□□ 0.35
CASQ2O14958 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CASQ2O14958 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CASQ2O14958 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
CASQ2O14958 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CASQ2O14958 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.2■□□□□ 0.34
CASQ2O14958 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.2■□□□□ 0.34
CASQ2O14958 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.2■□□□□ 0.34
CASQ2O14958 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CASQ2O14958 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.2■□□□□ 0.34
CASQ2O14958 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.2■□□□□ 0.34
CASQ2O14958 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.2■□□□□ 0.34
CASQ2O14958 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.2■□□□□ 0.34
CASQ2O14958 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.2■□□□□ 0.34
CASQ2O14958 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CASQ2O14958 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CASQ2O14958 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ2O14958 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CASQ2O14958 GMCL1P1-201ENST00000463439 1581 ntBASIC17.19■□□□□ 0.34
CASQ2O14958 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.19■□□□□ 0.34
CASQ2O14958 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
CASQ2O14958 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CASQ2O14958 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CASQ2O14958 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.19■□□□□ 0.34
CASQ2O14958 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CASQ2O14958 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.19■□□□□ 0.34
CASQ2O14958 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.19■□□□□ 0.34
CASQ2O14958 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.19■□□□□ 0.34
CASQ2O14958 AC005181.1-201ENST00000604782 1256 ntBASIC17.19■□□□□ 0.34
CASQ2O14958 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CASQ2O14958 DOC2GP-204ENST00000639052 2548 ntBASIC17.19■□□□□ 0.34
CASQ2O14958 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CASQ2O14958 AL355312.1-201ENST00000407115 2176 ntBASIC17.19■□□□□ 0.34
CASQ2O14958 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CASQ2O14958 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CASQ2O14958 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASQ2O14958 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.19■□□□□ 0.34
CASQ2O14958 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CASQ2O14958 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CASQ2O14958 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CASQ2O14958 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CASQ2O14958 AC007326.2-201ENST00000624224 7579 ntBASIC17.18■□□□□ 0.34
CASQ2O14958 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASQ2O14958 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.18■□□□□ 0.34
CASQ2O14958 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CASQ2O14958 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CASQ2O14958 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.18■□□□□ 0.34
CASQ2O14958 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.18■□□□□ 0.34
CASQ2O14958 AL160286.2-201ENST00000567150 934 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms