Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 MTCL1P1-201ENST00000446207 792 ntBASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 AC112698.1-201ENST00000510299 916 ntBASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 AL353801.3-201ENST00000609898 542 ntBASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 AP000550.4-202ENST00000639755 178 ntBASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV5-4A0A0C4DH59 IER3-202ENST00000376377 1350 ntBASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 AC016734.2-201ENST00000624325 1377 ntBASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 AC006116.8-202ENST00000587620 1550 ntBASIC17.79■□□□□ 0.44
TRBV5-4A0A0C4DH59 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 AC068880.1-201ENST00000507289 2297 ntBASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 ARMC10P1-201ENST00000313754 855 ntBASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 GUSBP12-201ENST00000513727 720 ntBASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 AC090616.6-201ENST00000582640 721 ntBASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 AL121672.3-201ENST00000608644 468 ntBASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 AL358472.4-201ENST00000633140 710 ntBASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRBV5-4A0A0C4DH59 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-4A0A0C4DH59 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms