Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 LINC01126-201ENST00000623515 1646 ntBASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 AC116562.4-201ENST00000641316 2276 ntBASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 AC105339.3-201ENST00000560043 636 ntBASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 AC012640.2-201ENST00000561606 901 ntBASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 MTDHP4-201ENST00000600287 670 ntBASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC187A0A096LP49 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 UPF3AP3-201ENST00000420996 769 ntBASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 KRT18P3-201ENST00000451602 1288 ntBASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 NKAPP1-205ENST00000585790 367 ntBASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 AC107918.4-202ENST00000641623 219 ntBASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CCDC187A0A096LP49 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC187A0A096LP49 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCDC187A0A096LP49 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC187A0A096LP49 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC187A0A096LP49 AL049812.1-201ENST00000432563 2267 ntBASIC17.08■□□□□ 0.33
CCDC187A0A096LP49 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC187A0A096LP49 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC187A0A096LP49 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCDC187A0A096LP49 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC187A0A096LP49 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC187A0A096LP49 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms