Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.72■■■□□ 2.19
PTPN22Q9Y2R2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PTPN22Q9Y2R2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
PTPN22Q9Y2R2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
PTPN22Q9Y2R2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.72■■■□□ 2.19
PTPN22Q9Y2R2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
PTPN22Q9Y2R2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.71■■■□□ 2.19
PTPN22Q9Y2R2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.71■■■□□ 2.19
PTPN22Q9Y2R2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PTPN22Q9Y2R2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.71■■■□□ 2.19
PTPN22Q9Y2R2 AL359258.2-201ENST00000564063 1566 ntBASIC28.71■■■□□ 2.19
PTPN22Q9Y2R2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
PTPN22Q9Y2R2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.7■■■□□ 2.18
PTPN22Q9Y2R2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
PTPN22Q9Y2R2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.7■■■□□ 2.18
PTPN22Q9Y2R2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PTPN22Q9Y2R2 AC008406.3-201ENST00000620001 1374 ntBASIC28.69■■■□□ 2.18
PTPN22Q9Y2R2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.69■■■□□ 2.18
PTPN22Q9Y2R2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.68■■■□□ 2.18
PTPN22Q9Y2R2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PTPN22Q9Y2R2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PTPN22Q9Y2R2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
PTPN22Q9Y2R2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PTPN22Q9Y2R2 AC103724.3-201ENST00000564481 992 ntBASIC28.68■■■□□ 2.18
PTPN22Q9Y2R2 AL031848.2-201ENST00000607670 837 ntBASIC28.68■■■□□ 2.18
PTPN22Q9Y2R2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
PTPN22Q9Y2R2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PTPN22Q9Y2R2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
PTPN22Q9Y2R2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
PTPN22Q9Y2R2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.66■■■□□ 2.18
PTPN22Q9Y2R2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.66■■■□□ 2.18
PTPN22Q9Y2R2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
PTPN22Q9Y2R2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PTPN22Q9Y2R2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PTPN22Q9Y2R2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PTPN22Q9Y2R2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PTPN22Q9Y2R2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.64■■■□□ 2.18
PTPN22Q9Y2R2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PTPN22Q9Y2R2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
PTPN22Q9Y2R2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PTPN22Q9Y2R2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.17
PTPN22Q9Y2R2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.64■■■□□ 2.17
PTPN22Q9Y2R2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.63■■■□□ 2.17
PTPN22Q9Y2R2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
PTPN22Q9Y2R2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PTPN22Q9Y2R2 AC018755.3-202ENST00000596210 929 ntBASIC28.63■■■□□ 2.17
PTPN22Q9Y2R2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.63■■■□□ 2.17
PTPN22Q9Y2R2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PTPN22Q9Y2R2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
PTPN22Q9Y2R2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.61■■■□□ 2.17
PTPN22Q9Y2R2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PTPN22Q9Y2R2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
PTPN22Q9Y2R2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.6■■■□□ 2.17
PTPN22Q9Y2R2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.6■■■□□ 2.17
PTPN22Q9Y2R2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
PTPN22Q9Y2R2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PTPN22Q9Y2R2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.59■■■□□ 2.17
PTPN22Q9Y2R2 AC239859.2-201ENST00000444165 318 ntBASIC28.59■■■□□ 2.17
PTPN22Q9Y2R2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.59■■■□□ 2.17
PTPN22Q9Y2R2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PTPN22Q9Y2R2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PTPN22Q9Y2R2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PTPN22Q9Y2R2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PTPN22Q9Y2R2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.58■■■□□ 2.17
PTPN22Q9Y2R2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PTPN22Q9Y2R2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PTPN22Q9Y2R2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PTPN22Q9Y2R2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PTPN22Q9Y2R2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PTPN22Q9Y2R2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.56■■■□□ 2.16
PTPN22Q9Y2R2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
PTPN22Q9Y2R2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PTPN22Q9Y2R2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.55■■■□□ 2.16
PTPN22Q9Y2R2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PTPN22Q9Y2R2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PTPN22Q9Y2R2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.54■■■□□ 2.16
PTPN22Q9Y2R2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
PTPN22Q9Y2R2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
PTPN22Q9Y2R2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
PTPN22Q9Y2R2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
PTPN22Q9Y2R2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.53■■■□□ 2.16
PTPN22Q9Y2R2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.53■■■□□ 2.16
PTPN22Q9Y2R2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.53■■■□□ 2.16
PTPN22Q9Y2R2 MIR3960-201ENST00000583311 91 ntBASIC28.53■■■□□ 2.16
PTPN22Q9Y2R2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
PTPN22Q9Y2R2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.53■■■□□ 2.16
PTPN22Q9Y2R2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PTPN22Q9Y2R2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PTPN22Q9Y2R2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PTPN22Q9Y2R2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.52■■■□□ 2.16
PTPN22Q9Y2R2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.52■■■□□ 2.16
PTPN22Q9Y2R2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.52■■■□□ 2.16
PTPN22Q9Y2R2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.52■■■□□ 2.16
PTPN22Q9Y2R2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.52■■■□□ 2.16
PTPN22Q9Y2R2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PTPN22Q9Y2R2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
PTPN22Q9Y2R2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PTPN22Q9Y2R2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PTPN22Q9Y2R2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
PTPN22Q9Y2R2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms