Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PCDHGB4Q9UN71 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGB4Q9UN71 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGB4Q9UN71 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB4Q9UN71 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.72■■□□□ 1.39
PCDHGB4Q9UN71 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHGB4Q9UN71 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB4Q9UN71 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PCDHGB4Q9UN71 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB4Q9UN71 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB4Q9UN71 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
PCDHGB4Q9UN71 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB4Q9UN71 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGB4Q9UN71 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGB4Q9UN71 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHGB4Q9UN71 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGB4Q9UN71 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGB4Q9UN71 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGB4Q9UN71 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PCDHGB4Q9UN71 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
PCDHGB4Q9UN71 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGB4Q9UN71 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGB4Q9UN71 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB4Q9UN71 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB4Q9UN71 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGB4Q9UN71 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGB4Q9UN71 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB4Q9UN71 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB4Q9UN71 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGB4Q9UN71 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB4Q9UN71 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB4Q9UN71 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB4Q9UN71 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHGB4Q9UN71 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHGB4Q9UN71 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PCDHGB4Q9UN71 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHGB4Q9UN71 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHGB4Q9UN71 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGB4Q9UN71 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGB4Q9UN71 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGB4Q9UN71 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGB4Q9UN71 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGB4Q9UN71 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PCDHGB4Q9UN71 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB4Q9UN71 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB4Q9UN71 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB4Q9UN71 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHGB4Q9UN71 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB4Q9UN71 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PCDHGB4Q9UN71 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGB4Q9UN71 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGB4Q9UN71 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGB4Q9UN71 DUX4L29-201ENST00000425409 679 ntBASIC23.65■■□□□ 1.38
PCDHGB4Q9UN71 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGB4Q9UN71 AC110285.7-201ENST00000624417 1536 ntBASIC23.64■■□□□ 1.38
PCDHGB4Q9UN71 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGB4Q9UN71 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PCDHGB4Q9UN71 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PCDHGB4Q9UN71 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHGB4Q9UN71 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGB4Q9UN71 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGB4Q9UN71 AC021231.2-201ENST00000594613 730 ntBASIC23.61■■□□□ 1.37
PCDHGB4Q9UN71 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGB4Q9UN71 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGB4Q9UN71 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB4Q9UN71 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB4Q9UN71 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
PCDHGB4Q9UN71 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGB4Q9UN71 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDHGB4Q9UN71 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PCDHGB4Q9UN71 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGB4Q9UN71 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PCDHGB4Q9UN71 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGB4Q9UN71 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGB4Q9UN71 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGB4Q9UN71 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHGB4Q9UN71 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHGB4Q9UN71 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
PCDHGB4Q9UN71 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PCDHGB4Q9UN71 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGB4Q9UN71 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGB4Q9UN71 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHGB4Q9UN71 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDHGB4Q9UN71 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB4Q9UN71 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDHGB4Q9UN71 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB4Q9UN71 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PCDHGB4Q9UN71 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.56■■□□□ 1.36
PCDHGB4Q9UN71 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGB4Q9UN71 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGB4Q9UN71 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGB4Q9UN71 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGB4Q9UN71 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGB4Q9UN71 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHGB4Q9UN71 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
PCDHGB4Q9UN71 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGB4Q9UN71 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGB4Q9UN71 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGB4Q9UN71 AC145676.1-201ENST00000514988 2004 ntBASIC23.54■■□□□ 1.36
PCDHGB4Q9UN71 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms