Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
LRTM1Q9HBL6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
LRTM1Q9HBL6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
LRTM1Q9HBL6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRTM1Q9HBL6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
LRTM1Q9HBL6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.68■■□□□ 1.38
LRTM1Q9HBL6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRTM1Q9HBL6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.67■■□□□ 1.38
LRTM1Q9HBL6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
LRTM1Q9HBL6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 DUX4L13-201ENST00000554103 1267 ntBASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 DUX4L15-201ENST00000611059 1267 ntBASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 DUX4L23-201ENST00000615195 1269 ntBASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 DUX4L24-201ENST00000617576 1269 ntBASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 DUX4L22-201ENST00000618238 1269 ntBASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 DUX4L20-201ENST00000619712 1269 ntBASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 DUX4L21-201ENST00000622058 1269 ntBASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 DUX4L10-201ENST00000622460 1267 ntBASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 DUX4L25-201ENST00000624915 1269 ntBASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.66■■□□□ 1.38
LRTM1Q9HBL6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRTM1Q9HBL6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRTM1Q9HBL6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.65■■□□□ 1.38
LRTM1Q9HBL6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.65■■□□□ 1.38
LRTM1Q9HBL6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
LRTM1Q9HBL6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.64■■□□□ 1.38
LRTM1Q9HBL6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LRTM1Q9HBL6 DUSP8P4-201ENST00000399538 1761 ntBASIC23.64■■□□□ 1.37
LRTM1Q9HBL6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
LRTM1Q9HBL6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRTM1Q9HBL6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LRTM1Q9HBL6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRTM1Q9HBL6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRTM1Q9HBL6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRTM1Q9HBL6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.63■■□□□ 1.37
LRTM1Q9HBL6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRTM1Q9HBL6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.63■■□□□ 1.37
LRTM1Q9HBL6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.63■■□□□ 1.37
LRTM1Q9HBL6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRTM1Q9HBL6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRTM1Q9HBL6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRTM1Q9HBL6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LRTM1Q9HBL6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.61■■□□□ 1.37
LRTM1Q9HBL6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRTM1Q9HBL6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.61■■□□□ 1.37
LRTM1Q9HBL6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRTM1Q9HBL6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LRTM1Q9HBL6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LRTM1Q9HBL6 DUX4L11-201ENST00000611504 1267 ntBASIC23.6■■□□□ 1.37
LRTM1Q9HBL6 DUX4L12-201ENST00000614593 1267 ntBASIC23.6■■□□□ 1.37
LRTM1Q9HBL6 DUX4L14-201ENST00000621227 1267 ntBASIC23.6■■□□□ 1.37
LRTM1Q9HBL6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
LRTM1Q9HBL6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRTM1Q9HBL6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRTM1Q9HBL6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.6■■□□□ 1.37
LRTM1Q9HBL6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 AC008813.1-201ENST00000536597 885 ntBASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LRTM1Q9HBL6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRTM1Q9HBL6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.58■■□□□ 1.36
LRTM1Q9HBL6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
LRTM1Q9HBL6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LRTM1Q9HBL6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRTM1Q9HBL6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRTM1Q9HBL6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRTM1Q9HBL6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
LRTM1Q9HBL6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms